Perca flavescens (yellow perch): 114554015 Help Entry 114554015         CDS       T07494                                  Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism pflv  Perca flavescens (yellow perch) Pathway pflv04510   Focal adhesion pflv04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:pflv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114554015  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114554015  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pflv00536]     114554015 Glycosaminoglycan binding proteins [BR:pflv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114554015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  114554015 NCBI-ProteinID:  XP_028431350 LinkDB All DBs Position 4:complement(19899847..19948649) Genome browser AA seq 1491 aa AA seqDB search MFSFMDSRTVLLLVATQVCLLTVVRCQDEDDQEDVISCTQDGQRYSDKDVWKPEPCRICV CDTGTVLCDEIVCEELKDCPKPEIPFGECCPICAADQSPPIGAPGAKGQKGEPGDITDVV GPRGPSGPMGPPGEQGLRGARGDKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLG GNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGSPGPQGFQGNPGEAGEPGQA GPMGPRGPPGPSGKPGDDGEAGKPGKPGDRGPAGPQGARGFPGTPGLPGIKGHRGYPGLD GAKGETGALGSKGESGAPGENGAPGPMGPRGLPGERGRPGPSGVAGARGNDGLPGPAGPP GPVGTSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSSGPSGASGNPGTDGIP GAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPP GVQGAHGPQGEEGKRGPRGEAGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPA GASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGAR GQPGVMGFPGPKGATGEPGKSGEKGLGGAPGLRGLPGKDGETGAAGPPGPAGSAGERGEQ GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEGGAAGATGPRGERGFPGERGAAGPQGLQ GPRGLPGTPGTDGPKGAIGPAGTGGAQGPPGLQGMPGERGASGIPGPKGDRGDLGEKGPE GAPGKDGGRGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFA GPPGSDGQPGIKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPPGAT GFPGAAGRVGPPGPNGNPGPAGPAGPSGKDGPKGVRGDGGPPGRQGDAGLRGAAGAPGEK GDAGEDGPPGPLGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDR GPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGATGTKGERGNTGPVGAPGAPGAPGAA GPVGPTGKQGDRGESGAQGPSGPSGPAGARGMPGPQGPRGDKGEVGESGERGQKGHRGFT GLQGLPGPPGQAGDQGATGPAGPSGQRGPPGPVGPAGKDGGNGLPGPIGPPGPRGRSGET GPSGPPGNTGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADQASGNLRQHDAEVD ATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCN METGESCVRPKPASIPRKNWWSSKSKDRKHVWFGETMNGGFHFSYGDDSLAPNTAAIQMT FLRLLSTEASQNLTYHCKNSVAYMDASAGNLKKAVLLQGSNDVEIRAEGNSRFTYSVMED GCTKHTGQWGKTVIEYRSQKTSRLPIVDIAPMDIGGTDQEFGVEVGAVCFL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttatggattccaggactgtactgctacttgtagcaacccaagtttgtcta ttaactgttgtaagatgtcaagacgaggacgaccaggaggatgttattagctgtacacaa gatggacagcgctatagtgacaaggacgtatggaaaccagagccttgtcgcatctgtgtg tgtgacactggaaccgtcctgtgtgatgaaattgtctgcgaggagctaaaagactgccca aaacctgaaatcccattcggagagtgttgccccatctgcgcagctgaccagtctccaccc attggagcacctggagctaagggtcagaaaggtgaacccggagacattaccgatgttgta ggaccaagaggaccaagtggcccaatgggcccaccaggagagcaaggactccgtggagcg agaggagataagggagagaagggaagccctggtccccgcggcagagatggtgagcccggc acccccggaaaccccggcccccctggacctccaggacctaatggaccccctggccttggt ggaaactttgctgctcagatggctggtggattcgacgagaaggctggcggcgcacagatg ggtgtgatgcaaggaccaatgggccctatgggtcccagaggaccacctggccccaccgga tcacctggcccacaaggtttccaaggcaacccaggagaggctggagagcccggacaggct ggcccaatgggtccccgtggcccccctggaccttctggaaaacctggagatgatggtgag gctggcaaacctggcaaaccaggagaccgtggacctgctggacctcagggagctcgtgga ttcccaggaactcctggcctgcctggcatcaagggacacagaggttatccaggtcttgat ggtgcaaagggagagactggagctcttgggtctaagggtgagtctggtgctcctggagag aatggcgctcctggacctatgggacctcgtggtttgcctggtgagagaggacgtcctgga cccagtggagttgctggcgcacgtggaaatgatggcttgcccggtcctgctggtccccct ggccctgtcggtacctctggagctccaggcttccctggctctcctggttcaaagggggaa gctggtcctactggtgctcgtggacctgagggtgctcagggaccccgtggagagtctggc actcctggatcatccggaccttctggcgcttctggaaaccctggtactgatggtatccct ggagccaaaggatcagctggtgctcctggtatcgctggtgctcctggtttcccgggacct cgtgggcctcccgggcctcaaggagcaactggacctctcgggcccaaaggaacatctgga gacccaggtatcccaggattcaagggagaggctggacccaaaggagaaattggaccgcct ggtgttcagggagctcatggcccacaaggagaagaaggcaagagaggacccaggggtgag gctggtgctgctggaccacttggacctcctggagagagaggagcccccggtaaccgtggt ttccctggtcaagacggtctggctggtcccaagggagcccctggtgagcgtggacctgct ggtgccagtggtcccaagggtgccaacggtgaccctggccgtcctggagagtctggtctg cccggtgccagaggcctgactggacgccctggtgacgctggtcctcaaggcaaagttgga ccttctggagcttctggtgaggacggtcgcccaggaccccccggtccacagggagcccgt ggacagcctggtgtcatgggattccctggacccaagggagcaactggtgagcctggcaag tcaggagagaaaggactgggtggagctcctggtctgagaggtctgcctggaaaagatgga gaaactggcgctgctggaccccccggccccgctggctctgctggagagagaggagagcaa ggacagcctggtccctcaggtttccagggtctgcctggacctcctggcccccctggtgag ggaggcaagcctggagaccagggtgttcctggagagggtggagctgctggtgctactgga cccagaggagagcgtggtttccccggagagagaggagctgccggccctcagggtctgcag ggaccccgaggtctgcctggaactcctggaactgacggacccaagggagccattggacct gctggtactggtggagctcagggaccccccggcctgcagggtatgcccggagagagagga gcttctggcattcctggacccaaaggagacagaggtgaccttggagagaaaggacctgaa ggtgctcccggcaaagacggtggtagaggtctaactggtcccattggtccccctggtcct ggtggccccaacggtgagaagggtgaatctggtcctgccggtccttctggtgctcctggt acccgcggtgctcctggtgacaggggtgagactggacctcctgggcctgctggatttgct ggaccccctggttctgatggtcaaccaggaatcaagggagagcagggagaatctggacag aagggtgacgctggtgcccctggaccccaaggaccctctggtgcccctggacctgccggt cctaccggtgtttttggacctaaaggcgctcgtggtgctcaaggacctcctggtgccact ggtttccctggagctgccggccgagttggaccccctggtcccaatggtaatcctggacct gctggtcctgccggcccttccggtaaagatggacccaagggtgtgaggggagatggtgga cccccaggcagacagggtgacgctgggctccgcggtgctgctggggctcctggagagaag ggagatgctggagaggacggtccccctggtcccctcggtccttcaggtcctcagggtttg gctggtcagcgtggtatcgtgggtctgccaggacagcgtggtgagagaggtttccctggt ctgcctggaccttctggtgagcccgggaagcaaggagctcctggtggcagcggagaccgc ggaccccctggacctgttggaccacctggactcactggacctgcaggagagcctggcaga gagggcaatcctggatctgatggacctcctggtagagatggtgctactggaaccaagggt gagcgtggtaacactggtcctgttggtgctcctggagctccgggcgcacctggtgctgcc ggcccagttggccccactggcaaacagggagaccgaggagagtctggtgcacaaggacct tctggaccttcaggacctgctggagccagaggaatgcctggaccccaaggaccccgcggt gacaagggtgaggtcggagagtccggtgagcgaggacagaagggacacagaggcttcact ggtctgcagggtctgcccggacctccgggtcaagctggagaccagggtgctactggacct gctggaccttctggacaaagaggaccacctggaccggttggccctgctggaaaggatggt ggaaacggtctgccaggacccattggaccccctggacctcgtggtcgcagtggagagacc ggtccctctggtccccccggaaacaccggaccccctggtcctcccggtccccctggccct ggcatcgacatgtccgccttcgctggtctgggtcaaactgaaaagtcccctgatcctctc aggtacatgagggccgaccaggcttccggaaacctccgtcagcacgatgctgaggtcgac gccactctcaaatctctcaacaaccagattgagaacatccgcagccccgagggatccaag aaaaacccggctcgcacctgcagagacctgaagctctgccatcctgactggaagagcgga gagtactggattgatcccaaccagggttgcaccgtcgatgcaatcaaggtcttctgcaac atggagacaggagagtcctgcgtcagaccgaagcctgccagtatccctcgcaagaactgg tggtccagcaagagcaaggaccgcaaacatgtctggttcggagagacgatgaatggaggt ttccacttcagctatggtgatgatagtctggcacccaacacggctgccattcagatgact ttcctgagactgctgtccaccgaggcttctcaaaacctcacctaccactgtaagaacagc gtggcctacatggacgcctcagcgggcaacctgaagaaggctgtgctgctgcagggctcc aacgacgtggagatcagagccgagggcaacagccgcttcacttacagcgtgatggaggac ggctgcacgaaacacacgggacagtggggcaagacagtgatcgaatacagatcgcagaag acctctcgtctgcccattgtagacattgcccccatggatattggaggaacagaccaggag tttggagtcgaagtcggagcagtctgcttcttgtaa

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