Perca flavescens (yellow perch): 114554108
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Entry
114554108 CDS
T07494
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114554108 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114554108 (usp4)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114554108 (usp4)
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114554108 (usp4)
Ubiquitin system [BR:
pflv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114554108 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
DUF1609
Motif
Other DBs
NCBI-GeneID:
114554108
NCBI-ProteinID:
XP_028431514
LinkDB
All DBs
Position
4:complement(25580163..25592542)
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AA seq
1033 aa
AA seq
DB search
MMAEGGGPEPGGAADSDSEPVAAEMPTPSTENQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQALKEHLIDELDYVLVPTEAWNK
LVSWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRTLFDIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSTASISSTVTNGDSSCSPGYTLNNSTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAKGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPESRPTQYRVVVPKLGTVTDLCSA
LSKLCGFPPENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
RERHSKHVGSSTSTMLFGQPLLLTVPRHNLVADVLYDKILEKIGRYVKQSQGPHNESRAS
ASSSSSASSSSSASASASASASASASATVASCSQAPECSTASSLNASLGGCGSPLSDGAS
CSASFSNGSNHSGTCNKTNGLYDGEEEAMDHQGSPEPENGQSEEEEEETSDLENGSKGDM
PKQSSPAKLFTFSIVNSYGTANISPLPCDGNVLKLNPHSTVAIDWDTESKKLCYDEQEAE
AYEKHESMLQPQKKKATVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLP
RVLVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPYIYDLVAVSNHYGGMG
GGHYTGYGKNKVDGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEEAPSKPQPSASLG
GAPEAVDDHMDTN
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagccgggtggcgcggcagactccgactctgagccg
gtagccgcagaaatgccaactccttcaaccgaaaatcaaaaacagactattgggtcacta
ttgaaaacaactctaaggaagggcgacgaatggtatctaatagacagccggtggttcaaa
caatggaagaagtatgtcggatttgacagctgggacatgtacaatgttggagaacgtagt
ctctatccaggaccaattgataactctgggctgttctcagaccaggagactcaagccctg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaggcatggaataaa
cttgtgagctggtacggctgccttgagggccagagacccatcgttaggaaggttgttgag
catggcatgtttgtcaagcactgtaaggtggaggtctatttgctggagctgaacttgtgt
gagaacgacaacatggacaatgttgtcacgcgtcatttcagtaaagctgatactatagat
actatagagaaggagatgaggacgctgttcgatatcccatcagagaaggagacacggctc
tggaacaaatacatgagcaacacctacgagcagctgaacaagccagacagcaccgtacag
gatgctggtctcttccaggggcaggtgcttgttattgaacggaagaatgaggatggcacg
tggcccagacaagcttcccatcccaaatccagtacaaccccatccaggaatttcactacc
tccccaaaactctcctccaactcaacagccagtatctcatcaacagtaacaaatggagac
agcagctgtagccctggctacacacttaacaacagcacctcctctggcaacagactgggg
ggctacaattcatacagctcctcctacaactacagagagtcgcagtcacagcctggcctg
tgtggtctcagtaatttgggcaacacatgcttcatgaactctgccctccagtgcctgagc
aatgcatctccactcacagagtacttcctcaatgaccagtatgaggcagagattaaccga
gagaatcccctgggaatgaggggcgagattgcagaggcctatgcagatctagtaaagcag
atgtggctgagccgcagcagctatgtggccccacgtactttcaagacccaggttggacgt
tttgccccccagttttcaggctaccagcagcaggactcgcaggagctgttggccttcctg
ctcgacgggctccatgaagatctgaaccgcgtcaaaaagaagccttatctggccctgagg
gatgcaaagggccgtccagacgagattgttgcaaaggaagcctggacgaaccaccgcttg
cgcaatgactcgattattgttgatattttccacggcctcttcaaatccactttggtgtgc
ccagagtgctccaaggtgtccgtaacctttgacccattctgctacctcacactgcctctg
cccatgaagaaggaccgtactatggaggttttcctggtgcgatcagaccctgagtcaaga
cccacacagtatcgagtcgtggtcccaaaactgggtacagtgacagacctgtgcagcgcc
ttgtccaaactctgtggattccctccagaaaatatggtggtggctgacgtttacaatcat
aggttccataaaatctacagacgggatgatggcctcaaccaaataatggaaaaagatgac
atctttgtatatgaggtacaggaggaggacagtgagaggatgaacctgcctgtgtatttc
agggagcgccactccaagcatgtcggaagttccacgagcaccatgctgtttggccagcct
ttactcctcaccgtgcccagacacaacctcgtagcagacgttctttatgacaagatccta
gagaaaattgggcgctatgtaaaacaatcccaaggccctcataatgaaagcagagcctcg
gcctcatcctcatcctcggcctcatcctcatcctcagcctctgcctctgcctctgcctct
gcctctgcctcagcctcagcgaccgtcgccagctgcagccaagctcctgaatgttccaca
gcatctagtctcaatgccagcctgggtggctgtggcagccccctgtcagacggggcctcg
tgcagtgccagcttcagtaacggcagcaaccactcagggacatgcaacaaaactaatggg
ctatatgatggtgaggaggaagccatggaccaccaggggagtccagagccagagaacggc
cagtctgaagaggaggaagaggagacctctgacttggaaaatgggtctaaaggagacatg
cccaagcagtcttcgccagccaagctcttcactttcagcatagtcaactcttacggaaca
gctaacatcagcccgctgccctgtgatggaaatgtcctcaaacttaatccgcattcaacg
gtggcgattgactgggacacagagtcaaagaaactgtgttatgatgaacaggaagcagag
gcctatgagaagcatgagagcatgctccagccccaaaagaagaaagccactgtggctctg
agggaatgcattgagctctttaccaccatggagacacttggagaacacgatccatggtat
tgtccaacatgtaagaaacaccaacaggccacaaaaaagtttgacttgtggtcactgcct
cgagttctggtagttcatctaaagcgattttcctacaaccggtgttggagggacaagctg
gacacggtggtggactttcccatcagggatctgaacatgtccgagtttgtgtgtgacccg
aaggccggcccctacatatacgaccttgttgccgtgtcaaaccactatggaggaatgggg
gggggtcactacaccggttatggcaagaataaagtggacggaaagtggtattactttgat
gacagcagtgtctcctctgcctcagaggaccagattgtgactaaagcagcctatgtgctg
ttctatcagcgcagagacgaggaagccccctccaaacctcagccttcggcctcgctggga
ggagccccagaagcagtcgatgaccacatggacacaaactga
DBGET
integrated database retrieval system
