Perca flavescens (yellow perch): 114554207
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Entry
114554207 CDS
T07494
Symbol
sox13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114554207 (sox13)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114554207 (sox13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF3915
Motif
Other DBs
NCBI-GeneID:
114554207
NCBI-ProteinID:
XP_028431691
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All DBs
Position
4:complement(40461203..40515552)
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AA seq
638 aa
AA seq
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MVEPSPPALHLLSGGDVSMASVGVKVEQEESCRGGGVISNPEPPKRSPSHGWSGNHPLEA
RQLTPPLSRSPSEGSPGKELPHRRSPLGLKEARTHERPEGQSNFKEVMPTIEKLLNADWK
EKLLDKSTVGAGQLKGTPEALAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHHNTQSLSVTSD
PQMALPLQPIPCKPAVDYHMQLLPNPRPPPVKRSSGSFRQEASQPLNLTSKPKGLELGKT
PSPQNLGSLALHGAYRSRDFQREVSHSPSRSALSFLGDGDVVTQAIHDAQQLLRGHGTGD
RERDRDKERERERDGGGKMEYKDSPRSERISHCERGEDHLSSDSEGALPISVPGSYPEAR
PPPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKGMSNQEKQPYYEE
QARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKNRRQEQRATYTHSQTEPQ
QIHYPHSDGQYPGGAAGSVSVSTMPFHHALLEHYLPQVPPALCRAEGQATPTSLPRERER
ERERERERERERERPPYSEGEESDGGERSEGELVLLTD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccagccctccagcactgcacctcctctctggcggcgatgtcagcatggcg
agcgtcggtgtcaaagtagaacaggaggagtcctgcagagggggtggagtcattagcaat
cctgaacctcctaagaggtctccgtcacatggttggtcaggaaatcatccgctggaggcc
cgccaattgaccccaccgctctcccgatccccttcggagggctctccaggtaaggagctg
cctcacagacgaagccccttgggactgaaggaggccaggacacatgaaagaccagaagga
caatccaacttcaaggaagtaatgcctaccattgagaagctgctgaatgctgactggaag
gagaaacttctggataaaagcacagtgggggcaggacaactgaaaggtaccccagaggct
ctggcggagaaggagctccagttgttgatgatgatcaaccagctgagtggtctgcgggag
cagctactaggagcccactctgagcaaaggaacatggccgccctgctgctggagaaacag
cagcagcagatggagctggctcgacaacagcaggaacagatcgccaagcagcagcagcag
ctgatccagcagcagcacaagatcaacctgcttcagcagcagatccagcaggtgaacatg
ccctacgtgatgatcccggctttccaccacaacactcagtccctctccgtcacctctgac
ccccagatggccctgccgctgcaaccaatcccctgcaagccagccgtggactatcacatg
cagctgctgcccaaccctcggcccccccctgtcaagaggagcagcggatccttccgacag
gaagccagtcagcccctgaacctgacctccaagccaaaggggctggagctggggaaaaca
ccaagtccacagaacctgggatccctggcgctgcatggggcctacaggtccagagatttc
cagagagaagtgtcccacagcccgtcacgatctgccctcagtttcctcggagacggagat
gtagtcacccaggccatccacgatgcccagcagctcctgaggggccacggcaccggagat
cgagagagggacagggacaaagagagagagagggagagagatggtggcggaaagatggag
tataaagattctccccgcagcgagaggatttctcactgcgagcggggggaggaccacctc
agcagtgactctgagggtgccctgcccatctcggtcccaggaagctaccctgaggcccgg
ccccctccctcctcgggccacatcaagagaccaatgaatgccttcatggtgtgggccaag
gacgagcgcaggaggatcctgcaggccttcccggacatgcacaactcctccatcagcaag
atcctgggctccaggtggaagggcatgtccaaccaggagaagcagccttactatgaagag
caagcgaggctgagcaggcagcatctggagcgctaccctgactacaagtacaaacctcgg
cccaaacggacctgcatcgtggagggacggaggctgagggtaggcgagtacaaggccatg
atgaagaaccgccggcaggagcagagagcgacctacacacatagtcaaacagaaccccag
cagatccactacccccacagcgatggccagtacccaggcggtgccgccggctcggtctcg
gtgtcgaccatgccctttcaccacgcgttactggagcactacctgccgcaggtccccccc
gcgctgtgtcgagccgagggccaggctacgcctacttccctgcccagggagcgagagagg
gagcgagagagggagcgagagagggagcgagagagggaacgccctccctacagcgaagga
gaggaaagcgacgggggagagaggagtgagggagaactggtgctcctgacagactga
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