Perca flavescens (yellow perch): 114554392
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Entry
114554392 CDS
T07494
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114554392 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114554392 (smarcd1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114554392 (smarcd1)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114554392 (smarcd1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114554392 (smarcd1)
PBAF complex
114554392 (smarcd1)
GBAF(ncBAF) complex
114554392 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
114554392
NCBI-ProteinID:
XP_028432007
LinkDB
All DBs
Position
4:complement(17284775..17311294)
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AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMVPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcggcaccgacaggaggtggtggtggagcaatggga
cctgggccaccggtaccgggcgcaggaccaggcatgggccccgggactccttctggaagg
atggtaccgtcgtcggccgcgcagaaccacatgtaccgctccccgatgcccgggcccggg
tacccgagaccaggcatgcctccatccagccgcatgaccccacagggaccagcgatgggc
cccccaggatacggcaacagcccagtgtcgcgccctgtgatgcctggcgtgatggacccg
tctcgcaagaggcccgccccccaacagatccagcaggttcagcagcagaaccgcaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaagcttacatggatcttctggcttttgagaggaagctagatcaaaccatc
atgcgcaagaggctggacattcaggaggccctcaagaggcccattaagcaaaagagaaag
cttcggatctttatatcaaacaccttcaaccccgcaaagccagatgctgaggatggagaa
ggcaccgttgcatcatgggagctacgtgttgagggacgtctgctggaagatacggctgtg
tccaagtatgaagccaccaaacagaagaggaagttctcctctttcttcaagtctctggtg
atcgagttggacaaagacctgtatggtccagataatcaccttgtggaatggcacaggact
gccaccactcaggagactgatggctttcaggtgaagaggcctggtgatgtgggtgttcgc
tgcaccgtcctgctcatgctcgactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctgggtatccacacccagactagacccgtcatcattcaggccctgtggcag
tacgtcaagacccacaaactccaagaccctcacgagcgggagttcataaactgtgacaaa
tacctgcagcagatctttgagactcagcggatgaagttctccgagatcccacagcgcttg
catgctctcctgatgccccctgaaccaatcatcatcaaccatgtgatcagtgtggaccct
aatgaccaaaagaagactgcttgttatgacattgacgtggaggtggatgacacgctaaag
actcagatgaactctttcctgctctccacagccagtcagcaggaaatagcaggactggac
aacaagatccatgaaaccattgagaccattaaccagctgaagacccagagagagttcatg
ttgagttttgccagagatcctcagggctttatcaatgactggctgcagtcccagtgcaga
gacctcaagaccatgacagatgtggtaggaaacccagaagaagagcgaagagcagagttt
tactaccaaccgtgggctcaggaggcggtctgccgctacttctactccaaggtccagcag
aggcgacaggagctggagacggcgctcggcatcaggaacacctaa
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