Perca flavescens (yellow perch): 114554422
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Entry
114554422 CDS
T07494
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114554422 (ccdc174)
03041 Spliceosome [BR:
pflv03041
]
114554422 (ccdc174)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114554422 (ccdc174)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114554422 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
114554422
NCBI-ProteinID:
XP_028432061
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All DBs
Position
4:complement(26187315..26192034)
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AA seq
579 aa
AA seq
DB search
MDKKKKPFDVTASSLVDLKAELYRKQEQFKQEKLGHENTGAGFTSNSKLKKPNVWSKQNA
GVSARAEKDAEQLTEEQCSLDTSKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKRETLAQKETERENEERENSSPVPPPQNPDEEWVDYVDALGRSRRCMKKDLPGFKKMD
QDLQGRGKASAEKTLLSEDMRRELQRQEWEREEEEAMKRPIGPIHYEDIRGQEARDLGVG
YFAFAQDEERRRKQRETLDMLRDQTTDQRTKREQLKDKRQVILQARLAKVRQRKMKKAKL
DGTEDEQRVEDNEVLDGEDKGELIGPLPPPEDSLKVSTLKKVEVEIQERKDTKPGVPHVR
EWDRGKEFMFSEWTTRRREERESEFAPPSAYFNEGKRERPGRNKTQQNKSKMSFKWTKSP
GGTSESKEDPQFQPKTALSPPQPQQNPPPPSHPQNSSQNPPPPSHPQNSSQSSPSNHPAD
SAPVSTPFHPHYPPPSFYPPPLPQFAGPPHLLPPFPPQYPNQYHPQYHPQYHPLYPAQYP
PQLQSQAPPQQPPQPVDLSQARQPAQSLDDMLSFYRNTT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaccattcgatgtgactgcttcatcgctggtggaccttaaagct
gaactgtacagaaagcaggaacaattcaaacaagaaaaactcggccatgaaaatactggt
gctggattcacatccaactccaaactcaagaaacctaatgtctggagcaaacaaaacgct
ggcgtttcagcaagagctgaaaaagatgcagagcagctgaccgaggagcagtgcagcctg
gatacatcaaaacgcaagttggaggagaaggccaaactgtacgagcaaatgactaaagga
gactttccagatgaagagacagagggattgttcctggtggatttcacgcagaagattatt
gacaaaaagagagaaacacttgcacagaaggaaaccgaaagagagaatgaggaaagagaa
aactcgtctcctgtccctcctcctcaaaacccagatgaggaatgggtggattatgtggac
gctttgggccgatcccgaagatgcatgaagaaagacctgccaggttttaagaaaatggac
caagaccttcaaggaagaggaaaagcctcagctgagaagaccttgctctcggaggacatg
cgtcgagagctgcagaggcaggaatgggagagggaggaagaggaggctatgaagaggcct
attggaccgatccactacgaggacatcagaggacaagaggctcgggatctcggtgtgggt
tactttgcgtttgctcaggatgaagagcggcgcagaaagcagagagaaacgctggacatg
ctcagagaccagacaacagaccagcgcactaagagggaacaactgaaggacaagaggcag
gtcatcctgcaggcccgactggccaaggtgaggcagaggaagatgaagaaggccaagctg
gatggcactgaggatgagcaaagagtggaggacaatgaagtcctagatggtgaggacaaa
ggtgaattaataggacccttgcctccaccagaggactccttgaaggttagcacactgaag
aaggtggaagtggagatccaggaaagaaaggacaccaaaccaggagttcctcatgtcaga
gaatgggaccgaggcaaagagtttatgtttagtgagtggacaactcggcgccgcgaagag
cgagagtcagaatttgcacctccctctgcgtactttaatgaggggaagagagagagacca
gggaggaataaaactcagcagaataaatccaagatgtccttcaagtggaccaaaagccca
ggaggaacctctgagagcaaagaggacccacagtttcagcctaaaactgctctttcacct
cctcaacctcaacaaaatcctccacctccttcacatccacagaactcctcgcaaaatcct
ccacctccttcacatccacagaactcatcgcagtcatccccttcaaatcacccagcggat
tcagctcctgtgtctactccttttcatccccactatccccctccttcattttatcctcca
cccctgcctcagtttgctggaccacctcacctacttcctccgtttcccccacagtacccg
aaccagtatcacccccagtatcacccccagtatcaccccctgtatcccgctcaatatcca
cctcagctgcagagccaggctccgcctcagcagcccccccagcctgtagacctcagccag
gcccggcagcctgcacagagtctagacgacatgctgtccttctacaggaacactacctga
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