KEGG   Perca flavescens (yellow perch): 114554448
Entry
114554448         CDS       T07494                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pflv03009]
    114554448 (rrp9)
Ribosome biogenesis [BR:pflv03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    114554448 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IP5PC_F Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_WDR19_1st PEP5_VPS11_N VGLL4 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 114554448
NCBI-ProteinID: XP_028432102
LinkDB
Position
4:complement(22783111..22796035)
AA seq 486 aa
MSSPFFMKKKENPKFAKKGKNTAVLKRKADGDSGGKSKLRAKKPNSKHNEEISSDSETES
PVVPRKRQSKEEIDYEETPQEKKLRLAKLYLEQLKEEEEDKAEEDSFETDLIAGRLQEDV
LEQKGKLQRLIAKDLMPPDASEIRVLRGHKLPITCLVISSDDKFIFSAAKDCSIIKWDVE
TGKKLHTMPGGRKGTEDRHVGHTAHILCMAISSDGKFLATGDVNKLIMIWEAETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSREC
CVTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLCTVKQAHGRHGDAGLEQPHWVASVAALQNSDTVASGASSCSHNSQVQLWKCGQNYRGL
QPLFSVPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPPNPE
EAKLTE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtcttcgcctttctttatgaagaaaaaagaaaaccccaaatttgccaaaaaagggaaa
aatacagcagtgctgaaacgaaaggctgatggggactcaggtggaaagagcaaactacga
gccaagaaacccaactccaaacacaacgaagagatttctagcgactctgagacagagagt
cctgtagtgcccagaaaaagacagtccaaggaagagattgattatgaggaaacgccacag
gagaagaagcttagattagccaaactttacctcgaacagctaaaagaagaagaggaagat
aaagcagaagaagactcatttgagactgatctgattgctggaagacttcaagaagacgtg
cttgaacaaaaaggaaagcttcagcggcttattgccaaagatctcatgccgccagatgct
tcagaaatcagggttttaagaggacacaaacttccaattacctgtctggtcatcagctct
gatgacaagttcatcttttctgctgccaaagactgctccatcattaagtgggatgttgag
actgggaagaaactgcacacaatgcctggcggaaggaaaggtacagaggatcggcatgtt
ggacatacagcgcatatcctgtgtatggccatatcatcagatggaaaattcttggccact
ggagacgtgaacaaactgatcatgatctgggaggcagaaacatgtaaacatctatataaa
ttcacaggacacaaagggcctgtttcgggtctttcattcaggaagggaactcatgatctg
tacagcgcctctcatgatcgctcaataaaggtgtggaatgtggacgagaatgcgtatgtg
gaaactctctttgggcatcaggatgccatcacaggactggacagtctgagccgtgagtgc
tgtgtgactgcaggaggaagggaccgctcggtgcgggtgtggaagatagccgaggaatct
cagctggtgttccacggccacgagggttcaattgattgtatccagctcataaacgaggag
cacatgataacaggagctgatgatggctctgtgtctctgtggagtgtcaacaagaagaag
cctctctgcacagttaagcaggctcacggtcgccatggtgatgcagggctggagcagcct
cattgggtcgcctcggtagcagcgcttcagaactcagatacagtcgcctcaggtgcctct
agctgttcacacaactctcaggtgcagctgtggaagtgtggccagaattaccgtgggctg
cagcctctattcagtgtgccagtgtccggtttcatcaacagtctgaagttttcgagctcc
ggtcagttcttggtggcaggagttggacaggagcacaggttgggtcgatggtggagacta
aaagaggccaagaatgggatctatgttattcctcttaaaaggaaacctccaaatccagag
gaagccaagttgactgaatag

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