Perca flavescens (yellow perch): 114554491
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Entry
114554491 CDS
T07494
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114554491 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114554491 (smarcc2)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114554491 (smarcc2)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114554491 (smarcc2)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114554491 (smarcc2)
PBAF complex
114554491 (smarcc2)
GBAF(ncBAF) complex
114554491 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114554491
NCBI-ProteinID:
XP_028432171
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All DBs
Position
4:complement(26513457..26526429)
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AA seq
1051 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDGYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNPPKTN
STKKDSDSTPVKGGTDMDEQEDESMETAGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQQIMSFPDKVKEKPADLQNFGLRTDMYSKKTGSAKSKSTASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDNSSSLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPDESSDESKSDSQPSEEKREAKDSKDGATEEEEK
QAENGKKEEERGREQEGEREADKTESEMGDGEKEKDGKEGTEEGQREAESEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHANQAA
PAPPPQGPTASQQAPSTPALQPAPSPAPPASAPAPESQPPQGAHTSPPCPPGSTPAAHSS
SSSSTTPVLHEPTAPLPGETLHPSAPVPPPQ
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagccccccaccaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggtgtttggtcggcatgtcagtaaccctccgctcaccaagctgccaatgaagtgt
tttctggacttcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtcgagatgttcatgacgatcgagaagtccttagtgcagaacaactgcctgagtagacca
gtcatctacctgagctctgacatagagccaaaactgcttgggaagctgaaagacatcatc
aaaagacatcagggttcagtaactgaggacaaggcctccagctcccatgttgttgttcct
attcctaccagcctggaggaagaggagtgggtgcgtcctgtgatgaagagagataagcaa
gtgctgctccactggggatattttcctgacggttatgatacctggatcccagccagtgag
attgaggctgctgtggaggatcctcccagcccagaaaagcccaggaaggtccatgccaag
tggattttagacctggaccagtataacgagtggatgaatgaggaggactatgaagtgggc
gagggctgccctaagaggaagaggatctcagccaaaaccctgacagatgaggtgaccaca
cctgacgagcggagggacaagaagcctggcagcgccaagaagaggaagaggtcaccgtcg
ccctcccctacccctccgcctcaggagagcaagaagaagaataccaaaaaagggccaacg
accccgtacaccaagtctaaacggggccaaagggaggaggaacaggaggatctaagtaaa
gacttggatgaagcatcacctgttccagcatctgaagagggaaacccacctaagacaaat
agcaccaagaaggactctgattcaactccagtcaagggaggaacagatatggacgagcaa
gaggatgagtccatggaaacagcaggcaaggaggaggaggaaggctctccgagcgtgaag
ggtgaaccagtgaaaggctctgaccttcacgaggacaatgtgactgagcaaactcatcac
attattataccgagctacgctgcctggtttgactataacagtgttcatgccattgagcgc
cgagccctgccagagtttttcaatgggaagaacaaatccaaaaccccagagatttacctg
gcgtacaggaacttcatgatcgacacctaccgactgaaccctcaggagtacctgacctcc
actgcctgccgcaggaacctggcaggagacgtgtgtgcaatcatgagagtccacgccttc
ctggagcagtggggcctgatcaactaccaggtggactccgagagccgacccacacccatg
ggtcccccacccacctctcactttcatgtcctggcagacactccatccagtctggtaccc
ctgcagcccaagacgtcccagacccctgctacccagcagataatgtccttcccagataaa
gtgaaggagaaaccagcagatctgcaaaactttgggctgcggactgacatgtacagcaag
aagactggctctgcaaagagcaagagtacagcgagctctatgagggagtggacagaacaa
gaaacactactactacttgaggggttggagatgtacaaggacgactggaacaaggtttca
gaacatgtgggcagccgtacgcaggatgagtgcatcctgcacttcctgaggctgcccatt
gaagacccttacttggaggacaactcctcgtccctaggaccactggcctaccagccggta
cctttcagccaggcaggaaaccctgtcatgagcacagtggccttcctcgcctctgtcgtc
gacccacgcgtagcctcggctgcagccaagtctgctctggaggagttttctcgtatgaag
gaagaggttcctgcagcgcttgttgaggctcatgtgcggcgggtggaggaggcagcgagg
gtcagtggccgacaggacccgctgtatggcctggagggtagtggcatcgcaggcactggc
ctagaggagggagacagacctgatgaaagcagtgatgaaagtaagagtgacagccaaccc
agtgaagagaagagggaggccaaggacagcaaagatggggcgactgaggaagaggagaag
caggcggagaatgggaagaaggaagaagaaagaggaagagaacaagaaggcgagagagag
gcggacaaaacagagtcagagatgggtgatggggagaaggagaaggatggaaaagagggc
acagaggaaggacaaagagaagcagagagcgaaggagagaggaaggctaaggtggagcgt
gatgtgggagaggggaacctggccaccgctgctgcgtctgcactcgctgctgctgctgtc
aaagccaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggctctgctg
gtggagacccaaatgaagaagctggagattaaactgcgacactttgaagaactggaaacc
atcatggacagagagagggaggctttggagtaccaacgtcagcagctgctggctgaccgt
cagtccttccacatggagcagttgaaatacgccgagatgagagcccgccagcagcacttc
cagcagattcagcaccagcagcacagccaggccgggggccctcatgccaaccaggctgct
ccagcacccccaccccagggtccgaccgcaagtcagcaagctcccagcacaccagcgctg
cagccggcccccagccctgcacctccagcctctgccccggcccctgagtcccaaccacct
cagggtgctcacacctcgcccccctgccccccaggctcgacccccgctgcccactccagc
tccagctccagcactactcctgtactccatgagcccaccgcccctcttcccggggaaaca
ctccacccttcagctccagtcccacctccacagtga
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integrated database retrieval system
