Perca flavescens (yellow perch): 114554528
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Entry
114554528 CDS
T07494
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114554528 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114554528 (stau1)
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114554528 (stau1)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114554528 (stau1)
mRNA cycle factors
Stress granule specific factors
114554528 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
114554528
NCBI-ProteinID:
XP_028432231
LinkDB
All DBs
Position
4:complement(23068300..23084385)
Genome browser
AA seq
695 aa
AA seq
DB search
MSQLQFQCPASPMPAASAPLQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NTTSVSNMANPKEKTPMCLVNEMARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALAETTLPKPTVRTPRNTGKNPEDGMTHTMELNALCMKLGKKPMY
KPIDPYPGMRPPNFNYNVRSPGPYQRSMQQYYYPFPPVGPMLYHMELSIGGQQFIGKGRT
RQLAKHEAAAKALKVLHKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVRVAVGEFTGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQTAEGMGPSKKVAKRNAAERMLELLGYKVPQPQPPKPALKTDEKTPLKKPGDGRKVT
FFEPGSVEEVALSSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGVCQVSQAKDYSRTVP
NPGKATITAMIANELLYAGTSLTAETILKNKNNLNQLPHGPLTRPSEQLSFLASVQNLQV
EYKDFPKNNKNEFVSLINCSSHPPLISHGIGKDVESCHDMAALNILKLLSELDQQLNERT
GNGPVSRCGKQEIDGDLHLKQANSSTLTQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagtttcagtgtccggctagccccatgcctgctgcctctgccccactg
cagctgggacaaccacagcctggctacagcatcccatgtgcctcaggcaccctaccctcg
gagagcgccagccagcccatcaggagctccgctctccccgcgggctcagccactccctac
aataccacctcagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagatggcccgttttaacaagattcaaccggagtataagctgctgtgtgagcaagga
ccagctcactccaagattttctcagttaggctcacactgggagatcagcactgggaggca
gaggggaccagtatcaagaaagcccagcattccgctgctgcatcggcccttgctgagaca
acacttcccaagcccactgtgaggacaccccgcaacacaggcaagaacccagaagatggc
atgacacataccatggagttaaatgcactatgtatgaagcttggtaaaaagcctatgtat
aaaccaatcgacccatacccggggatgagaccaccaaacttcaattacaatgtccgatct
ccaggaccttaccagcgctctatgcaacagtactattacccatttcctccagtgggacca
atgttataccacatggagctttccatcggaggccagcagtttattgggaagggacgcaca
cgtcagttggccaaacatgaggctgctgccaaggccctgaaagtcctgcacaaggagcca
atattacaacagttgccagtgatgaatggagaacccgaggaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcattgaaacgcaacttacctgtcaactttgaggtt
ttaaaagaagaaggtcctccccatatgaagagttttgtcgtgcgtgttgcagttggggag
tttactggagaaggcgaaggaaagagtaaaaagattgccaagaagctggcagcagcagcg
gtgcttggggagttgaagaggctaccccatatacccagtgtggaaaagacgctgccacgc
atcaaaaagaaaaccaaatccatcatcaagctgcagacgagcccagaatacggccagggg
atgaatcccatcagccgcctggctcagatccagcaggccaagaaggagaaggaaccggag
tacagcatggtgacagaacgaggtttacctcggcgcagagagttcgtcatgcaggtgaca
gtgtgcggccagactgcagagggaatgggacctagtaagaaggtggccaagaggaacgca
gcagagagaatgctggagctcttgggatataaagtgcctcaacctcagccccctaaaccg
gcactcaaaactgatgaaaagaccccactgaaaaaacctggtgatgggcgcaaagtgacc
ttctttgaacctggctctgtagaggaggtggcattgagttccaaggaggaggacttccgc
ctgccttacttgagccaccagcagctacctgcaggtattctgcccatggtccctgaggtg
gctcaagcagtcggggtctgccaagtatcccaggccaaggactacagtcgaactgtaccc
aacccaggcaaggccacgatcactgccatgattgccaatgagctgctttacgcagggaca
tcactgactgctgagactatcctaaagaacaaaaataatctgaaccaactgccccacgga
cccctcaccaggccttcagaacagctgagctttcttgcatcggtgcagaacctgcaggtg
gaatacaaagatttccccaaaaacaataagaatgagtttgtgtcactaataaactgctcc
tcccacccaccgctcatcagtcatgggattgggaaagatgtagaatcctgtcatgatatg
gctgcattgaatatactaaagttgctctcggagttggaccagcagttaaatgaaaggaca
gggaatggaccagtctctcggtgtggcaagcaggaaatcgacggtgacttgcacctcaaa
caggctaactcaagcacattgacacaaaccctggatggcacggtttag
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