Perca flavescens (yellow perch): 114554638
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Entry
114554638 CDS
T07494
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114554638 (tmf1)
Membrane trafficking [BR:
pflv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
114554638 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
114554638
NCBI-ProteinID:
XP_028432391
LinkDB
All DBs
Position
4:complement(33332574..33343348)
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AA seq
1168 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDTVVKPYDDVTIPGKLSLSGGWG
MTQWEAPLEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLPPGDVQGGTNTQVVSVPP
TKSQIRPQEKEKKNIEAVAQKEVETQNSAPADESQENQTVAESQPVELESSPTAPYADTI
LLQPVSPASSSIDLPCNPDSEKSIVKTDASSPVFVDSKTEQSQKASDHEVEQDTTDSSEP
AAVTSEPKSSTPSDPSPSPSSKGVLIEHKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIEV
LDHDSVLSESSASSRQETGESKAGLHLMQGSFQLLTASTCGDFPRLEDYSKLTESSGSSS
DAFERIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPPLTVSSAVCQKQEDGGEEK
VGEEKEKEEEKEEEEEEEEEGFTETMREQSLDEMEESGRSVTPVNSEQPEELTEQEQESE
ANPLSGPTSKAEEQTTPPITEEMRSVSTVQILELQKVIDDLSGRLEKRESQLLAVSKDKA
KLDEQCDNLKDEVISLKEESSTVQSLKEEFTQRIADAERKAQLACKERDIAKKEIKGLRE
ELSTRLHSSDTMEIIKEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRGKEKESDARMTKQ
QRKIKEQEEELGQLQQVLDGKEEVERQHRENIKKLNAVVERQEKELSKLQAESEELQEKN
RSLQAALDNCYKELAELHKAHVSRTSEAEEAALSRETQAKEQLSLAYEKAQEEARMQQEA
LANQVADLRLALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLR
QIENLQASLGGQTASWEKLEKNISDRLADAQAQLAVAVEKERSATEDLLSIKSQLASLES
QNSLLRQEKARLLAQLDSERNKREKLEDESSREHVDLENLRGEHSRMLEEAKKEKLLLTN
QLEMEKMKVEQEKKKCYLAHEALKEKERKAMTHSVGEAPASSTPSLSRSSSISGADNAGL
HTSVLSQDDCLDHSLGTMTMSMSMSGTNLYEAARLSGGSSVIENLQSQLKLREGEIAQLQ
LEISSLERSRSVMAEELVRLTNQNDEMEEMVKDIPKLKVQLKDLEQRHNTILQMYGEKAE
EAEELRLDLEDVKNMYKIQIDELLKNQK
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagctttaacaacagct
cagaagtcaatcgaccgagttctggacatcaaagaagaggaccaatggggtgacacagtt
gtaaagccctatgatgatgttacaataccggggaagctgtcattaagtggaggatgggga
atgacgcagtgggaagcaccccttgaagaaaagaccaccactcctcctccttcctctgag
gccattactactcctgttactcgcacagttgtggatgaatccgaaaacttttttagtgcc
tttctgccacctggagacgtacaaggtggcaccaacacccaggtagtgtctgtaccccct
actaagtctcaaataaggcctcaggagaaagaaaagaaaaacatcgaggctgtggcacaa
aaagaagtagagactcaaaattcagcacctgcggatgagagtcaagagaatcagacagtt
gctgagagccagccagttgagcttgagtcctcaccaacagcaccgtatgcagacactatc
ctcctgcagccagtttcccctgcttcttcttccatcgatcttccttgtaaccctgacagc
gaaaaaagcattgtaaaaacagatgctagctctccagtttttgtagactcaaaaacggag
cagtcacagaaagcatcagatcacgaggttgagcaggataccacagattcatctgaacct
gctgctgtcacttctgagcctaagagctctacaccttctgatccttcgccctccccgtcc
tctaagggggttctcatagagcataaagactcaaaggtggaggaccgtcaaaatgacacc
ccctctcctccagtcagcgctttctcctcaggaacctctaccaccagtgacattgaagtt
cttgaccatgactctgtgttgagtgagagctcagccagctccagacaagaaacaggggag
agcaaggctggccttcacctaatgcagggctccttccagcttctcactgcctccacctgt
ggagatttcccccgtctggaggactattccaaactcacagagagcagcggctcttcctcg
gatgcatttgagcgcatagattcattcagcgtgcagtcattggatagccggagtgtcagt
gaggttaactcggatgatgagatccctgggagtcggacgctagcgtctgtcactgcaggc
cctcctttaacagtgtcatcagctgtatgtcagaagcaggaagatggaggagaagagaag
gtaggagaggagaaggagaaggaagaggagaaggaggaggaagaggaggaggaggaagag
ggctttactgaaacaatgagggaacagtcgctggatgagatggaggagagcggacggagt
gtgacacctgttaatagtgagcagcctgaagagttgacagaacaggaacaggaatccgag
gctaacccactgtctggtcccacctccaaagctgaagaacagaccactcctccaatcact
gaagagatgagaagtgtctcaacagttcagattttggagcttcaaaaggttattgacgac
ttgtcgggccgccttgagaagagagagtctcagctgctggctgtcagcaaagacaaggcc
aagctggacgagcagtgtgacaatctcaaagatgaagtgataagcctgaaggaggagagc
tccactgttcagtccctaaaggaagagttcacccagcgcatagcagatgcagagaggaag
gctcagctggcctgcaaagaaagagacatagccaagaaggaaataaagggtttgcgagaa
gagctttctacaagacttcactccagtgatacaatggagatcatcaaagagaaggaagaa
cagatcagaggcctgctggaagaaggtgaaaagttgtccaagcagcagctgcagcacagc
aacatcatcaagaaactgcgtgggaaggagaaggagagcgacgcaaggatgaccaagcaa
cagaggaaaatcaaggagcaggaggaggagctcgggcaactgcagcaggttctagatggg
aaggaggaggtggagaggcagcacagggagaacatcaagaagctgaacgctgtggtggag
cggcaggagaaggagctgagcaagctgcaggcggagtctgaggagctgcaggagaagaac
cggagcctccaggctgctctggacaactgttacaaggagctggcagaacttcacaaggcg
catgtcagcaggaccagtgaggctgaagaagcagctcttagcagggaaacacaggccaag
gagcagctgagcctggcttatgagaaggcccaggaggaggccaggatgcaacaggaggct
ctggccaatcaggtggctgacctgagactggctctgcagagagctgagcaacagcaagca
aggaaagaagattatttaagggaggagatcagtgagctgcagcagaggcttcaggaagca
gagactaggaaccaggaactcagtcagagtgttacctctgcaacacggcccctactgcga
caaattgagaacttacaggcctcattgggtggacagacggcatcctgggaaaaacttgag
aagaacatctctgatagactagcggatgcccaggcacagttggccgttgctgtggaaaag
gagcgatcagcaacagaagaccttctgtccatcaagtcccagctggcctctctggagtcc
cagaattccctgttacgccaggagaaggcccggctcctggctcagctggattctgagaga
aacaagagagaaaaactggaggatgagagtagcagggagcatgttgatttggaaaatctg
agaggagaacacagtcgcatgctagaagaggccaagaaagaaaagctgctgctgaccaat
caattagagatggagaagatgaaggtggagcaagagaagaagaaatgctacttggcacat
gaagcactgaaggaaaaggagcgaaaggctatgacccactctgtaggagaggccccagcc
tcctccacaccctccttatcccgctctagctcaatcagtggggctgacaatgctggtcta
catacctctgttctttcccaggatgactgtttagaccactctctaggtacaatgaccatg
tctatgtcgatgagcggcaccaacctgtacgaggccgccaggctgtctggaggctccagc
gtcatagagaacctccagtctcagctcaaactccgagaaggagagatagcacaactgcag
cttgagatctccagtctagagaggagtcgttctgtgatggcagaagagctggtccgactc
accaatcaaaacgatgagatggaggagatggtgaaggacatccccaagttgaaagttcaa
ctcaaggatctggagcagaggcacaacactatcctgcagatgtatggagaaaaggctgaa
gaggcagaggagctgagactggaccttgaagatgtgaagaacatgtacaaaatccagatt
gatgaactcctgaagaaccagaaataa
DBGET
integrated database retrieval system
