Perca flavescens (yellow perch): 114554732
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Entry
114554732 CDS
T07494
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114554732
Spliceosome [BR:
pflv03041
]
Common components
Common spliceosomal components
General mRNP proteins
114554732
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
114554732
NCBI-ProteinID:
XP_028432534
LinkDB
All DBs
Position
4:complement(291523..301832)
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AA seq
495 aa
AA seq
DB search
MADDLDIEEMLDAPYRKDEPKNLSPNGEEERTKKKKRSRSRDKKRSRSRDRKRSRSRERK
RSRSRDKRRSRSRERRSSRERGGRYRDHHKHRRRSKSKSPVRKEKSPVRLPVDTLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGNVRDVRMISDRNSRKSKGIAYIEFVEATSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSAGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSATGTSKGYGFITFSDADCAQKAMEQLNGFELAGRPMKVGNVTE
RTDSSASFLDSDDLERSGIDLGTTGRLQLMARLAEGSGLQMPPAAQQALQMSGVIAIGAM
AAVSAAMNPGLNMNSGAMNLPSQPLATHCFQLSNMFHPNSEKPPGWEMDIQHDVIEECNK
HGGVVHVYVDKNSAQGNVYVKCPSIPAAMAAVNALHGRFFAGKMITAAFVPLPAYHHLFP
ESATASQLLVPPTRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacattgaagagatgctggatgctccgtacaggaaggatgaaccc
aagaacctgagccccaacggagaggaggaacgaaccaagaagaagaagcgcagccgcagc
cgtgacaagaagcgcagccggagtcgagacaggaagcgcagccgcagcagagagcgtaaa
cgcagccgcagccgagacaagagaagaagtcgcagcagagagcgccgcagcagtagagag
aggggcggccgctaccgagaccaccacaagcaccggcggcggtccaagagtaagagtccc
gtgaggaaggagaagagtcccgtcaggctccctgtagatacgctgactccagaggagcgg
gacgcccgcaccgtgttctgcatgcagctggcggccaggatccgccccagagacctggag
gacttcttctccgctgtggggaacgttcgggatgtgaggatgatctctgacaggaactcg
cgcaagtcgaagggcatcgcctacatcgagtttgtggaggcaacatcggttcctctcgcc
atcgggctgactggacaaaggctgctgggagttcccatcatcgtacaggcctcacaggcg
gagaagaaccgagcggctgctgcagctgctgccaacagcctgcagaagggatctgcggga
ccaatgaggctttatgtcggctctctgcacttcaacatcaccgaggagatgctgagagga
atctttgagccgtttggacggattgagagcatccaactgatgatggacagtgccacggga
acctctaaaggctacggcttcatcactttttcagacgccgactgtgcccagaaagcgatg
gagcagctgaatggctttgagctggcaggtcggccgatgaaagttggaaacgtgacggag
cggaccgactcctcggcctcgttcctcgacagcgacgatctggaacgctccggcatcgac
ctcgggaccaccggacgcctgcagctgatggcccggctcgctgagggttcaggtctacag
atgcctccagctgcccagcaggctctgcagatgagtggagtgattgctattggagccatg
gctgctgtgtcagctgcgatgaatccgggtctcaacatgaactctggtgcgatgaatctt
ccctctcagccgctcgctacacactgcttccagctctccaacatgttccaccccaacagt
gagaagcctcctggctgggagatggatatacagcatgatgtcatcgaggaatgtaacaaa
catggaggagtcgtccacgtctacgtcgacaaaaactctgcacagggaaacgtttacgtt
aagtgtccgtcgatccctgccgccatggccgccgtcaacgcgctgcacggccgattcttt
gccgggaagatgatcacggcagcgttcgtccctctgccggcctaccaccacctgttcccg
gagtctgccacagccagtcagctgctggtcccgcccacacggcggtga
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