Perca flavescens (yellow perch): 114554846
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Entry
114554846 CDS
T07494
Symbol
cxxc1
Name
(RefSeq) CXXC-type zinc finger protein 1
KO
K14960
COMPASS component SPP1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114554846 (cxxc1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114554846 (cxxc1)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
114554846 (cxxc1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
114554846 (cxxc1)
COMPASS/SET1 complex (yeast)
114554846 (cxxc1)
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
Motif
Other DBs
NCBI-GeneID:
114554846
NCBI-ProteinID:
XP_028432714
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Position
4:34846911..34856207
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AA seq
571 aa
AA seq
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MDSEMSDIDPVPGPETSSMEGENAPLYCICRKPDINCFMIGCDNCSEWFHGHCINITEKM
AKAIREWYCMRCRDKNSSLEIKYRSKKNREKEAELDRGSDRQYSTPSTPDYKSERRRGSK
VKRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKDE
ELSLQERRDNSYHRRRRYSEDYDSEAELYQQYKAAGLKNNMAWNSDEDDEPPFSPVMRKK
AVKVKHVKRREKKFDKKKESRRHKQKQKHKDRTRYSERSDLRDSTGQRQCLGPSCVEAAR
PNSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRREQQNARLRLT
EMERRFHELEGIIAKAKQQAVQQDEEVNEGDSEDTDLQIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPVDEVCG
CPLVKNVFELTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPVTTDLRSNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtctgacattgaccctgtaccagggcctgagactagcagtatggag
ggagagaacgcaccactgtactgtatctgccggaaaccagacatcaactgcttcatgatt
ggctgtgataactgtagtgagtggttccatggccattgcattaacatcactgagaagatg
gcgaaggcaatccgggaatggtattgcatgagatgcagagataaaaactcctcactggaa
ataaaatatagatcaaagaaaaaccgagagaaggaagctgagcttgacagaggatctgac
agacagtacagcaccccgagtactccagactataagagtgaaagacggcgtggatctaaa
gtgaagcgttcagtccgaatgtgtggggaatgtgagccctgccgaaggactgaggactgt
gcccagtgtgacttctgcaaggacatgaagaagtttggaggccccaacaaaatcagacag
aagtgcaggtttaggcaatgtgaggttcgagccaggaaaatgctgcgtgtgaaggatgag
gaattgtctttgcaagaaaggagggacaattcctaccacagacggagacgatactccgag
gactacgacagtgaagcggagctctaccagcagtacaaggcagcagggctgaaaaacaac
atggcatggaatagtgatgaagatgatgagccgcctttcagtcctgtcatgcgtaaaaaa
gctgtgaaggtgaagcacgtgaagagacgagaaaagaagtttgacaagaaaaaagagtct
cgacgccacaaacagaagcagaagcacaaagacagaaccaggtacagtgagaggagcgac
ctccgagacagcaccggacagcgtcagtgtcttgggccaagctgtgtggaggcagcgaga
cccaactccaaatactgctctgaggactgtggcatgaagttagctgccaaccggatctat
gagatcctccctcagcgtatccagcagtggcagcagagtccctgcatagctgaggagcac
ggtaagaagcagctggagcgcatccgtcgggaacagcagaacgcccggctgcgcctcacg
gagatggagcgacgcttccacgaactggaaggcatcatcgccaaggccaagcagcaggca
gttcagcaggatgaggaggtgaatgagggcgacagcgaggacacagacctgcagattttc
tgtgtgtcttgtagtcatcccatcaatccaaaagtggcactgagacatatggagagatgt
tacgcaaagtatgagagtcagacttcctttggttccatgtaccctacaaggatagaagga
gcgactagactcttctgtgatgtgtacaatccccaaagcaaaacatattgtaagaggctt
caggttttgtgtccagaacattccagagatcctaagatcccagtggatgaggtgtgtgga
tgccctctggtgaaaaatgtgtttgagctgaccggagactactgcagggtctcaaaaagg
aaatgcaacaaacattacaactgggaaaagcttagaagagcagaagtggacttggagcga
gtcagggtgtggtacaagttggatgagctctttgagcaggagcgtaatgtcaggactgca
atgaccaacagagctggtctgctcgctctgatgttgcaccaaactattcagcacgacccc
gtgacgaccgatctccgtagcaacaaggacaggtag
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