KEGG   Perca flavescens (yellow perch): 114555157
Entry
114555157         CDS       T07494                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03082  ATP-dependent chromatin remodeling
pflv03083  Polycomb repressive complex
pflv04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114555157
   03083 Polycomb repressive complex
    114555157
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    114555157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pflv03036]
    114555157
Chromosome and associated proteins [BR:pflv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     114555157
  Histone modification proteins
   HAT complexes
    HATB complex
     114555157
   HDAC complexes
    Sin3A-HDAC complex
     114555157
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     114555157
    PRC2.2
     114555157
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     114555157
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114555157
  Chromatin remodeling factors
   NuRD complex
    114555157
   NuRF complex
    114555157
   NuRF complex (fruit fly)
    114555157
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 114555157
NCBI-ProteinID: XP_028433147
LinkDB
Position
1:complement(6613654..6631678)
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPTKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHAVEAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctgataaagaggtgtatgacgatgctgtggaagaaagggtcatcaatgaagaatac
aagatttggaagaaaaacacacctttcctgtatgacctggtgatgactcatgcgctggag
tggcccagccttactgtccagtggcttccagatgtcagcaggcctgaggggaaggactac
gcagtacaccggctggtgttagggacccatacgtccgatgagcagaaccacctggtgatt
gccagcgtccaggtaccaaatgatgacgcccagtttgacgcatcgcactacgacagcgaa
aaaggagcagagtttggcggatttggctctgtaagtgggaagatcgagatcgagattaag
atcaaccacgagggagaggtcaaccgagcccgctacatgccccagaaccactgcatcatc
gccaccaagacccccacctctgacgtgctggtcttcgactacaataagcacccgactaag
ccagatcccagcggggagtgcagtcctgacttgcgcctgaaaggccaccaaaaagaaggc
tatggcctttcctggaatcccaacctcagcggcaatttgctcagcgcctccgacgaccat
accatctgtctatgggacattggggcaggcccaaaggaagggaagattgtggatgccaag
accatcttcaccggccacacagcggtggtggaagatgtttcctggcatttgctccatgaa
tcgctgtttggctcagtggctgacgaccagaaactcatgatatgggacactcggtccaac
accacgtccaaagccagccacgcagtcgaagcgcacactgctgaggtcaactgtctcagc
ttcaacccctacagcgagtttattctcgccactggttctgctgataagactgttgcactg
tgggatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtacaatggtctccacacaacgaaaccatcctggcctccagcggcaccgaccgg
cgtctcaacgtctgggacctcagtaaaatcggggaggagcagtcggcagaagatgctgag
gatggcccaccagagctgctgtttatccacggtggccacacagccaagatctctgacttc
tcctggaaccccaatgaaccctgggtcatctgctcggtgtcggaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaacgacgaggagccagacaacacccctgcatca
gagctggaggctcagggatcataa

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