Perca flavescens (yellow perch): 114555169
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Entry
114555169 CDS
T07494
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114555169 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114555169 (dis3l)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114555169 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
114555169
NCBI-ProteinID:
XP_028433165
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All DBs
Position
1:40635283..40664832
Genome browser
AA seq
1049 aa
AA seq
DB search
MIKTEKILHLKSCRGRKVRVVREHYLREQVPCFSSLCQADCDNADGKVLPGDLTHYVVPD
VGVVVDYLEILEFRELQGVVFTQTACQAVQHSKGRRQYNRLRNLLKDPRHDCVLFANEFQ
EYSYCPREKGESQEKWQTRCVYSAAVWYYNHLAGMMDVVMITEDQDAVAQYSSLNSGVYV
ISVQDYLQDFWSQVQAAHELYSSISQALQEKESEGTEREFTEHLPAEVLEAGIKSGRYIQ
GTLNVSKHQHSEASIMTEGLSNKNKDLSWGVLVCGGKNRNRAVHGDVVVVELLPKSEWRG
KDTALTEAQGEEKSGEEADSKPMPTGRVVGILQRNWRDFVVTFPPREGPQPQSRNSQRIL
AVPWDRRIPKIRISTQQADALQDHRVVVRIDSWESTSQYPNGHSVRVLGRAGELETEVQT
ILIENCIHVPPFSDAQLREMPVNSPERPWRMDPAQVAERRDLRESHLVFSIDPRGCEDVD
DTLSVRSLTGGELELGVHIADVTHFVPEGSLTDLEARSRATTYYLADRRYDMLPAVLSAD
LCSLLGGVDRYAMSVLWELDAQTLEVRNVWYGRTLIRSSYQLHYELAQALLNAEQAEVPE
LAGLGSEEKDAKLAELTQALEMLTHVARHLRAQRDRGGALELEGVEVRAQLDEERNITAL
VPRLPLEVHETVAECMIYANHWVARKIQEAFPHQALLRRHPPPRQEFFSQLVDSAAARGF
TIDTRTNKALAESLDRALDPQDPLVNRLLRIMATTAMSQALYFSTGLQSQDQYYHYGLAL
DRYTHFTSPIRRYADIVVHRLLTAAISMDTRADPGRALANNKELEELAHHINTKNWASQR
AQKLSTELFQCLYFKERDPESDPRCVADAVIYAIRDNGVLVFVSEYGVKGPVYLRNREGQ
VVAAGRDGRCEWQSGSVRRHADHITTVSSCGTSTFTLFDHITIRISVRSTSCHADSLNLE
VISNKPHRSAEPQQPSSQGRCQLVQEVVRLAEEASQQAQEKAARRPKLSREEREFSQSKT
PNLYSLLEEIRELALLDLDMAAHVCATTA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgattaagacggagaagatccttcacctgaagagctgccgcgggcggaaggtccgtgtg
gtccgggagcattatctgagggagcaggttccctgcttcagctctctgtgtcaggcggac
tgtgacaacgcagatggcaaggtgctgccaggagatctgacccactacgtggttcctgat
gtcggagtggtggtggactatctggagatcttggagttcagagagctgcagggcgtcgtc
ttcacccagaccgcctgccaggccgtgcagcacagcaagggacgcaggcaatacaaccgt
ctgcgcaacctgctcaaggaccctcgacacgactgcgtgctgtttgccaatgaatttcag
gagtattcttattgtccgcgagagaagggggagagccaggagaagtggcagaccaggtgt
gtgtactctgcagcagtatggtactataaccacctggcaggtatgatggatgtagtgatg
atcacagaggaccaggacgccgtggctcagtacagcagcctcaactctggagtgtacgtc
atctccgtccaggattatttacaggacttctggtcccaggtgcaggcagcacatgagctg
tacagctccatttcccaggcgctacaagagaaggagagcgagggcacggagagggagttt
accgaacacctgcccgctgaggtcctggaggctggaatcaagtctgggcggtacattcag
ggtactctgaatgtcagcaagcaccagcacagtgaagcttcaatcatgacggagggtttg
tccaacaagaacaaagatctgagttggggcgtgttggtgtgcggtggaaagaatcgtaac
cgagccgtgcacggcgacgtggtcgtggtggagctgttgccgaagagcgagtggagagga
aaggacacggccctgactgaggctcagggggaggagaagagcggagaggaagccgacagt
aaacccatgccgacaggccgtgttgtggggatcctgcagaggaattggagggactttgtg
gtaacttttccccccagggaggggcctcagccccagagcaggaattcccagcgcatcctg
gccgtgccctgggaccgtcgcatccccaagatccgcatcagtactcagcaagccgatgct
ctgcaggaccacagagtggtggtgcgcattgattcatgggagagcacgtcgcagtatccc
aacggccacagcgtgcgggtgctgggtcgggctggagagctggagacggaggtccagacc
atcctcatagagaactgcatccacgtgcctcccttctcagacgcacagctgagagagatg
ccggtcaactctccggaaaggccgtggaggatggatccggcccaggtggcagagcggcgg
gacctcagggagagccacctggtcttcagcatcgacccgcggggctgcgaagacgtggac
gacacgctgtcggtgcgcagcctcacaggcggggagctggagctcggtgtccacatcgct
gatgtcacccactttgtccccgagggctcactcactgacctggaggcacggtcaagggct
acgacgtactacctggcagaccgcaggtacgacatgctgccagctgttctcagtgcagac
ctctgctctctgctcggaggagtcgacaggtatgcgatgagcgtgctgtgggagctcgat
gcacaaaccctcgaggtcagaaacgtgtggtacggccgcacgctcatccgctcctcctac
cagctgcactatgagctggcccaggcgctcctcaacgcagagcaggctgaggtaccggag
ctggccgggctcgggtccgaggagaaggacgctaagctagctgagctaacccaggctcta
gagatgctgacacacgtcgccagacacctccgggcacagagggacaggggaggcgcgctg
gagctggaaggggtggaggtgcgtgcccagctggacgaggagaggaacatcacagccctg
gtcccccgtctgcccctggaggtccacgagacggtggccgagtgcatgatttacgccaac
cactgggtggcacgcaagatccaggaggccttcccccatcaggccctgctgaggcgccac
ccgccgccacggcaggagttcttcagccagctggtggacagcgccgccgccaggggattc
accatcgacaccaggaccaacaaggctttggctgaatctctggaccgagctctggaccca
caggacccgctggtgaacaggctgctgagaataatggccactacagccatgtcacaggct
ctgtacttctccactgggcttcagtcccaagaccagtactaccattacggtctggctctg
gaccgctacacacacttcacctcacccatccggcgctacgctgacatcgtggtgcaccgc
cttctcaccgccgccatcagcatggacacgcgggcggaccctgggagagccttagccaat
aacaaagaactggaagaattggctcatcatatcaacaccaagaactgggcgtcccagcgg
gcccagaagttgtccacagagctgtttcagtgtctctactttaaagaacgagaccccgag
tcagacccgcgctgtgtggccgacgccgtcatctacgccatccgggacaacggcgtgttg
gtgttcgtctcagagtacggtgtgaaaggaccggtgtacctgaggaaccgagagggccag
gtggtggctgcgggccgggacggccgctgcgagtggcagagcggctcggtgcggcgccat
gccgaccacatcaccaccgtctccagctgcggcacctccaccttcacactgtttgaccac
atcactattcgtatttctgtgcgctcgacatcttgccacgcagacagtctgaacctggag
gtcatcagcaacaagccccaccgcagcgccgagccccagcagccctcctcacagggccgc
tgccagctggtccaggaggtggtgcgcctggccgaggaggcgtcccagcaggctcaggag
aaggcagcccggcggcccaaactctccagagaggagagagagttcagccagagcaaaact
cccaatctgtactctctcctggaggagatcagagagctggctctgctggaccttgacatg
gccgcacacgtctgtgcaacaacagcatag
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