Perca flavescens (yellow perch): 114555197
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Entry
114555197 CDS
T07494
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114555197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114555197
03036 Chromosome and associated proteins [BR:
pflv03036
]
114555197
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114555197
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114555197
Chromatin remodeling factors
BAF complex
114555197
PBAF complex
114555197
GBAF(ncBAF) complex
114555197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114555197
NCBI-ProteinID:
XP_028433217
LinkDB
All DBs
Position
5:30060198..30119653
Genome browser
AA seq
1585 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSEYSQDSMYPMHKTMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYISPHPSPMGVHEHASSPMSGGGGGRGPTPPHMPSSQSGPMMPMDPQSAVPNMSNMSQ
QGRGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQPQQ
QAPIASPYNRPPGMPMAPLGGPQSSPCPTPTMQGHNQSTGPKPWSDGQVGENQANAQKHL
TPVPSGRPSPAPPQVSAVPAGPMPGNSVTPQPPGQQVSPMLQMQKQNRITPIQKPQGLDP
VGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVAC
MRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHA
KDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLID
QKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKKKKKKKKMADGDGEGPSTIGPD
GEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGS
EFEEEEEEEGTKAETEDKKIIDPNGVEMFVVATKHIIESAKQDVDDEYSVPTGQTSSQSY
YGVAHAVIERVEKQSSLLINGSLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIA
LITYLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPVLRRGLVPQLRSG
KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG
TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV
LRPFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQRGILLTDGSEKDKKGKGGA
KTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFQNGVISGLDLYRASGKFELLDRILPKL
QATNHRVLLFCQMTTLMTILEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIF
LLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEEEDEIPDDETLNQM
IARNEDEFELFMRMDMDRRREEARNPKRKPRLMEEDELPSWIIRDEAEIERLTYEEEEEK
MFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSREDG
GSKAKKKRGRPPAEKHSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPE
YYELIRKPVDFKKIKDRVRNHKYRSVVDLERDVMLLCHNAQTFNLEGSQIYEDSIVLQSV
FKSARQKIAKDEESEDDSDEDDDDEDESEAEAKSVRVKIKLSKELRSTDKGKKRQSRGKA
KPVVSDDDSDEDLDDNDQSDKSDDD
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacatcaggtggtatgtcccatcctggcccttctccaggggca
ggtctatccccagggcccatcttgggccccagccctggaccggacccctccccaggctct
gttcacagtatgatgggacccagtcctggacctggaacacccaacgcacctcatggcatg
cagggtcagggacaaagtgaatactctcaggacagcatgtatcccatgcacaagaccatg
gagggtatgaatgagaagaccatggcagatgcgatgcactttggtcacatgaaaggtgtt
gggatgagatctcttcatagtggtatggggcctccacagagtccgatggaccagcacagc
caaggatacatatccccccatccatcccccatgggcgtccatgagcatgcttctagtccc
atgtcaggaggtggaggtggtaggggacccacaccgccccacatgccttcctcccagtca
ggccccatgatgcccatggatccccagtcagccgtgcccaacatgtccaacatgagccag
cagggccggggaccttctgctttcagtccggtccagctgcagcagctcagagctcaaatc
ctggcctacaagatcctaggccgtgggcaacccctgcctgaaaacctccaactagctgtt
cagggcaagaggagtctacccacaatgcaacagcagcaacaacagcagcagccgcagcag
caggcaccaattgctagtccttacaacaggcctccaggtatgccaatggcacctttgggt
ggtccccagtcaagtccctgccccaccccaaccatgcaaggacacaatcaaagcacagga
cccaagccttggtctgatggtcaagttggtgaaaatcaagccaatgctcagaagcacctc
acccctgttcccagtggacgcccgtcacctgcaccacctcaggtctcggctgtgccagct
gggcccatgccaggcaattcggtgacccctcagcctcctgggcagcaggtgtcccccatg
cttcagatgcagaaacagaaccgcattacaccaatccagaagccccagggcctggaccca
gtggggatcctgcaagagcgagagtacaggttgcaggctcggattgcacatcgaatccag
gaactggaaagtttgccaggctctctgccccccgacctgaggactaaagccacagttgag
ctcaaggcactgcgtctacttaacttccagcggcagctgagacaggacgtggtggcatgt
atgaggcgagacacgaccctggagacggccctcaactccaaggcttacagacgcagcaag
cggcagacgctgagggaggcacgcatgactgagaagctggagaaacagcagaagctcgag
caggaaaagaagcgcagacagaaacatcaggaatatctcaacagtattcttcagcatgct
aaggactttaaagagtatcaccgctcagtgtccggtaaaatgcagaaactcactcgagct
atcgccacctggcacaccaacacagagcgggaacagaagaaggagaccgagagaatcgag
aaggagaggatgaggagactcatggcagaagatgaggaaggctaccgaaaactaattgac
caaaagaaggacaagcgtctggcctacttgctgcagcagacggatgaatacgtggccaac
ctcacaaccctggtgtacgaacacaaagctgcccaagctgccaaggagaagaagaagaag
aagaagaaaaagaagatggcggatggagatggcgaaggccccagtaccattggacctgat
ggagagcccatggatgagagcagccaaatgagtgagctgccagtcaaagtgattcagacg
gagactgggaaagttctgcagggaacggacgctcccaaatccagccagctggaggcctgg
ctcgagatgaaccctgggtatgaagtcgctccgcggtcggacagcgaggagagcggctcc
gagtttgaggaggaggaggaagaggaggggaccaaggcagagacggaggacaagaagatc
atcgatcccaatggagttgaaatgtttgtggtggctaccaagcacattatcgaatcagcc
aagcaggatgtggatgatgagtacagtgttcctactggacaaaccagctcccagtcttac
tatggtgtggcccatgctgtcattgagagggtggagaagcagtcgtcgctgctgatcaac
ggctcactcaaacattaccaggtccaggggctggagtggatggtgtccctctacaacaac
aatctaaacggcatcctggcagatgaaatgggcctcggcaaaaccatccaaaccatcgct
cttattacctacctgatggagcataagaggatcaacggtccctttctcattattgttcct
ctctcgactttgtctaactgggtatatgaacttgacaagtgggcaccctctgtggtcaaa
attgcttacaagggcacccctgtgttgcgccgtgggcttgttcctcaactccgcagcggg
aagttcaacgtcttgctgaccacctatgaatacatcattaaggacaagcacatactggcc
aagattcgttggaagtacatgattgtggacgagggtcaccgcatgaagaaccaccactgt
aagctgacccaggtgttgaacacccactatgtggccccccgccgcctcctcctcaccggt
acacctctgcagaacaagctgcccgagctgtgggccctgctcaacttcctcctgcccacc
atctttaagagctgcagcaccttcgagcaatggttcaacgccccgttcgccatgacagga
gagagggtcgacctgaatgaggaggagaccatcctgataatccggcgtttgcataaagtg
ctccggcccttcctgctacgcagactgaagaaggaagtggagtctcagctaccagagaag
gtggagtatgtcgtaaaatgtgacatgtctgccatacagaaggttttgtaccgccacatg
cagagaggcatccttctcactgacggctcagagaaagacaaaaagggcaaaggaggagca
aagaccctgatgaacactatcatgcagctgaagaagatctgcaaccatccatacatgttc
cagcacattgaggaatcttttgctgagcacttgggctttcaaaatggtgtcatcagtggg
cttgatctgtatcgagcttctgggaagtttgagcttctagatcgcatcctgccaaagctg
caggccaccaaccacagagtcctgctgttctgccaaatgaccactctcatgacaatcttg
gaggactactttggctaccgaaactttcagtatttacgtcttgacggaaccaccaagtct
gaggaccgagcggccctgctgaagaaattcaacgaggaagggtctcagtacttcatcttc
ctgctcagcaccagagccggtggcctcggcctcaacctgcaggcggccgacactgtcgtc
atcttcgacagtgactggaacccacaccaggaccttcaggcgcaggaccgggctcaccgc
atcggtcagcagaatgaggtgcgtgtgcttcgtctctgcaccgtcaacagcgtggaggag
aaaatcttggcagctgccaaatacaaactcaacgtggatcagaaggtcatccaggcgggc
atgttcgaccagaagtcgtcgagccatgaacgccgtgccttcctccaggccattttagag
acggaggagcagaatgaggaagaagatgagatacccgatgatgaaaccctcaaccagatg
atagcccgcaatgaagatgaatttgagcttttcatgcgcatggacatggaccgacgccgg
gaggaagccaggaacccaaagcgcaagcctcgtctcatggaggaggacgagttgccttct
tggatcatccgagacgaggctgagatcgaacggctcacgtatgaagaagaggaggagaag
atgttcggccgagggtcacgctgtcgtcgggatgtggactacagcgacacgctgactgaa
aaacaatggctacgggccattgaggatggaaacctggaagagatggaggaggagatccgg
ctgaaaaagcgcaaacgcaaaagacgccaggacaaagactcgtcaagcagagaagacggg
ggctctaaggccaagaagaaacgtgggcgtccaccagctgagaaacactcccccaacccc
ccgaaactcaccaagcaaatgaacaccatcatcgacacggtcatcaactacagagatggg
tcaggaagacaactaagtgaggtcttcgtccagttaccatctaggaaggagctcccagaa
tattacgagctgatcagaaaacctgtggacttcaaaaagatcaaagatcgcgtgagaaac
cataaatacaggagtgtggtagacctggagagggacgtgatgctgctttgtcacaacgcc
cagaccttcaacctggagggatcccagatatacgaggactccattgttcttcagtctgtg
tttaagagtgccaggcagaagattgccaaggatgaagagagtgaagatgacagcgatgag
gatgatgatgacgaagatgagtcagaggctgaagccaagtctgtgcgggttaagatcaag
ctgagtaaggagctgcgcagcacagacaaaggcaaaaagaggcaaagccgagggaaggcc
aagccggtcgtcagcgacgacgacagcgacgaagacctggatgacaatgatcagtcggac
aagagcgacgacgactga
DBGET
integrated database retrieval system
