Perca flavescens (yellow perch): 114555208
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Entry
114555208 CDS
T07494
Name
(RefSeq) probable voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04010
MAPK signaling pathway
pflv04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114555208
04020 Calcium signaling pathway
114555208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflv04040
]
114555208
Ion channels [BR:
pflv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114555208
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
114555208
NCBI-ProteinID:
XP_028433240
LinkDB
All DBs
Position
5:complement(8653510..8882239)
Genome browser
AA seq
2363 aa
AA seq
DB search
MARFEDELSSRYGGMCPVGPARGASRLPGPPGVQRMYKQTMAQRARTMAIYNPIPVKHSC
LSVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGTYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRIDTDEQAADFPCGLEAPARTCANGTACREYWIGPNYGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKNNNSVLKRT
KKSKNDLINAEEEDLEDHFTDISSAAPPGSPFTRASLKSKNENSSYFRRKEKRIRFTIRR
LVKSQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTFALYLAEFVFLGLFLAEMSMKMYGLG
PQNYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVHRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEVAINKKLALQKAMEVKEVSPMSATNMSITAKEQQKSMKTMSVWEQRANQLR
RQNQASCEALYSELDLEERLRLSSALNIRPDMKTHLDRPLVVEPRDGPLLAGHQHHHHKP
SMPEEAETANDPPPPVPHQARRHHRHRDRDRARTREGTNDNSGTSKDGGHHVHHSHSKDH
DSSRGKEGKSERSQSQEGGRRHHHQSSVDDSGGGGAMSEKEHRHHHSHRQSRGGNGTVNS
GGRGERRSRHKNGRSSNRDGDRNSRGDSGANGERRRHRTHGSRGQSTVEGEVSNEKEKSH
RFGDSEGEFLAISPQQGSEGGNCPPDRPEDSDNQRNITRTGQTSIHIPPVTITSPPGDTT
LIQINSIDGETMPMNEKALVDRGQSGPKPILPYSSMFIFGQTNPVRRLCHYIVTLRYFEM
SILVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGAY
FRDLWNILDFIVVSGALVAFAFSGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKVLQKDCKGQFLYYDRDEV
AAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDTGPSPGYRIEMSI
FYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMP
QNMQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMKFHGAPDFYETMLKNLNIVFTTLF
SLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAAR
LIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIEMNEDTAINH
HNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRVCDKLSGSDGEECGSDFAYFYFVSFI
FLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQM
LLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADDNSVHFTSTLMALIRTALGIKLASGMVA
QRISDYELKKELSTVWPSLSQKTMDLLVTPHKHNELTVGKVYAALMIFEYYKQNRARRLQ
QQQQGTSGSQCKVGALFKPLLPLTHMQEKDLPMMLNSVEPPSMLQPQPKSHAKSQPQTRP
SSNSLNNGGTLQGHDHNIKASSSWVMEKPKEAPRAKTKRTMSRGPSEDTPDTAIIQESVE
MSEMETSASSTIPVPGSGLENQGRAASMPRLNAELQRSHSRHSPGIHLASVPDASPMKRS
ASTAAPQRPQEVNLRDYTLEKPSQDRPHHHHHHHRCHHRRDRDKDKYREKRQRSLDAPLG
GQPPSSAGATEDPESDPAASRERARDRGRSHDRKHHSSVDKQRYYSCDRYCSREHCHTKS
ATTSCVASPSEGQETSTKQGSGWVKGSPVALSSSSSTPSRGRRQLPQTPLTPRPGVAYKT
ANSSPVHFVSSQASLSPGRLSRGQSEHNTFRQSGSHHFPCPVTRISSEPFLGQGHGEDLG
RLYGSLRDQLDVFQDAVSRSPSPCAGHSSRTALPRMMGALLPAPQQNLRVPNGYHFSFGG
RTSPGSGVRAPRYYQEAEEDEWC
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttgaagacgaactgtctagccgctatggaggcatgtgtcccgtgggcccg
gccagaggggccagccggctgccggggcctccgggggtccagaggatgtacaagcagacg
atggcccagagagccaggaccatggctatttacaaccccattccagtcaaacacagctgc
ctctccgttaaccgctctctgttcatcttcagcgaggataatatcatacggaaatatgcc
aaaaagatcacggagtggcctccatttgagtacatgatcctggccaccattattgccaac
tgcattgtgctggccttggagcaacacctaccggcgtcagacaaaacaccaatgtcagag
cgtttggacgacacagagccctattttatcggaatattttgttttgaggctggaatcaag
atcatcgccctgggctttgcctttcacaaaggcacctatctgcgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcttggcaactgtgggggcggattttgatcta
agaacactgagggcagtgagagtactgcggccgctcaaactggtctctggcattccaagt
cttcaggtggtattgaagtccattatgaaagccatggtacctctgctgcagattggcttg
ctgctcttctttgccatcctcatgtttgccatcatcggcctcgacttctacatgggcaag
ttccatcgcacctgcttcagaatagacacagacgagcaagctgcagatttcccctgtggc
ctggaggctccggcgaggacctgtgccaatggcactgcctgcagggagtactggatcgga
cccaactatggcatcaccaactttgacaacatcctctttgctgttctcactgttttccag
tgcatcaccatggagggatgggtggacattctctataacgccaacgatgcctcagggaac
acgtggaactggctttacttcatccccctcatcatcatcggttccttcttcatgctcaac
ctggtgttaggtgtgctgtcaggggagtttgccaaggagcgagagcgggtggagaagagg
caagaattcctgaagctccgcagacaacagcaaatagagagagagttaactgggtacctg
gagtggatctgcaaagcagaggaggtgatgctggccgaggaagacaagaacgcagaggag
aaatctttggatggagcgtggtacaaaaggaaaaacaacaactctgtgctgaaaaggaca
aagaagagtaagaatgacctcatcaatgcagaggaagaagacctggaagaccacttcact
gacatctcatctgctgcccccccagggtcgccgttcacacgggccagcttgaagagcaag
aacgagaactcgtcttacttcaggaggaaagagaagagaattcgcttcaccatccgccgt
ctggtcaagtcccagagcttctactggactgttttgtgtctggttggcctcaacacgttg
tgtgtagccatagtacactatgaccagcctgaatggctcacctttgcattatacctggcc
gagtttgtattcctgggcctgtttctggcagagatgtccatgaaaatgtatggcctcgga
ccccagaactacttccactcctcattcaactgttttgactttggggtgattattggcagt
atttttgaggtgatctgggctgccatcaaacccggggcctcatttgggatcagtgtcctg
cgggctctgagactgctcaggatcttcaaagtcaccaagtactggaactccttgaggaac
ctggtcgtatcccttctcaactccatgaagtctattatcagcctgttgttcctcctcttc
ctcttcattgtggtctttgctctgctgggcatgcagctgtttggtggccaatttaatttt
gaagatgaaacgccaacaaccaactttgacacattcccagcagcgattctcactgtcttc
cagatactaactggggaggactggaacgcagtcatgtaccatgggatcgaatcacagggg
ggcgttcacagggggatgttctcctccatttatttcattgttctcactctctttggaaac
tacacactcctcaacgtgttcttggccattgctgtcgataacctcgcaaatgcccaggag
ctcactaaggatgaagaggagcaagaggtggccattaataagaagcttgcactccagaag
gccatggaggtaaaggaggtcagccccatgtcagccactaacatgtccatcacagctaag
gagcagcagaagtcaatgaagacaatgtcggtgtgggagcagagggccaaccagctgagg
aggcagaaccaagcgagctgcgaggctctctacagtgagctggatcttgaggagcgtctt
cgcctgtcctctgccctgaacatccggcctgacatgaagacccacctcgaccggccgctg
gttgttgagcctcgcgacgggcctttgctggccggccatcaacaccaccatcacaagccc
tccatgccagaggaggcagagactgccaatgaccctccccctcctgtgcctcaccaggcc
cgtcgccaccaccgccacagagacagggaccgggccagaacaagagaggggacgaatgat
aacagtggcaccagtaaggacgggggccaccacgtccatcacagccactccaaagaccat
gacagcagccggggcaaagaggggaagagcgagaggtcccaaagccaagaagggggcagg
agacatcaccatcagagctcagttgatgacagcggaggtggaggagccatgagcgagaaa
gagcatcggcatcatcattcacaccggcagtccagagggggcaatgggacagtgaacagt
ggtgggaggggagagcgaagatcccgccacaaaaatggacgttcgtctaacagggatggg
gataggaattccagaggagacagtggtgccaatggagagcggaggagacatcggactcat
ggatccaggggccaatccacagttgaaggagaggtgtccaacgagaaagagaagagtcac
aggtttggcgactcagagggtgagttcctcgccatctccccccagcagggctctgaaggg
ggcaactgtcctcctgaccgaccagaggactcagacaaccagaggaacatcacaagaacc
ggccaaacctccatccacattcctcctgtgactatcacttccccacctggagacaccacc
ctcatacaaattaacagtattgacggtgagacaatgcccatgaatgagaaggccctggtg
gatcgaggtcaaagtggacccaaacccattctgccctacagctctatgttcatcttcgga
cagactaatccggtgaggcggttatgtcattacattgtgactctgcgttattttgagatg
tccatcctggttgtcattgctatgagcagtatcgctttggcagcagaggaccctgtctgg
acgaacgcccctcgcaacaatgtgctcaaatatctggattatgccttcactggtgttttc
acttttgaaatggtgatcaagatggtggaccttggcctgttgcttcatcctggagcctac
ttcagagacctgtggaacattctggacttcatagtggtcagtggggcgctggtggctttt
gcattttcggggaccaaaggcaaagacatcagcactatcaagtcactgagggttctccga
gtgctcaggcctctcaagaccatcaaacgtctgccaaaactcaaggcggtgttcgactgc
gtggtcaattctttgaagaacgtgctgaacatcctcattgtttacatcctcttcatgttc
atctttgctgtcatcgcagtacagctcttcaaaggaaaattcttctactgcacagatgag
tccaaggtcctgcagaaggactgcaaaggacagttcctctactacgatagggacgaggtg
gccgccatgcccagagagtggaagaaatatgagttccattacgacaatgtgctgtgggcc
ttcctgacccttttcactgtctccactggggagggctggccaactgttttgaagcactct
gtggatgctacctttgaagacacaggtcctagtccaggctaccggatagaaatgtccatc
ttctatgtggtctactttgtggtcttccctttcttttttgtcaacatctttgtggctctg
atcatcatcaccttccaggagcagggagacaaggcattgtctgagtgcagcttggaaaag
aatgagagggcttgtattgactttgccataaacgccaaacctctgacacgctacatgccc
cagaacatgcagtccttccagtacaggatgtggaagtttgtggtctcagctccatttgag
tactccatcatgatcatgattgctctcaatactgtggtactcatgatgaagtttcatgga
gctccagacttttatgaaacgatgctgaagaacctcaacatagtcttcaccactctcttc
tctctggagtgtatcctcaagatcattgcttttggtccactgaactacttgaaggatgct
tggaacgtgtttgactttgtcacagtgttgggaagcatcactgacatcctggtgactgaa
atcaatactacggacaggctgctgaacctgagtttcctgaggctgttcagagccgctcgg
ctcatcaagctgctgagacagggctacactatccgcatcctgctgtggaccttcgtccag
tcctttaaggccctgccttatgtttgccttctgattgctatgctgttcttcatttatgcc
atcattgggatgcaggtgtttggcaacattgagatgaatgaagacacagctatcaatcac
cacaacaacttccgcactttcctccaagctctcatgctgctgttcaggagtgcaactggt
gaggcctggcacgagatcatgttatcatgtttgagtcaccgagtctgtgacaagctatca
gggtccgatggggaagagtgcggcagtgatttcgcgtacttctactttgtctcctttatc
ttcctctgctccttcctgatgctgaacctgtttgtggctgtcataatggataactttgag
tacctaaccagagactcctccatcctggggcctcatcacctcgatgagttcatccgggtt
tgggctgagtacgacccggctgcatgtggccgtatcaagtacctcgatatgtatcagatg
ctgctccacatgtccccacccttaggtttgggaaagaaatgtccgccaagagtcgcctac
aagcgcctcgtcaaaatgaacatgcccatcgctgatgacaacagcgtccatttcacctcc
actctgatggccctgattcgcactgccctggggatcaaactggcctcaggcatggtagct
cagcgaatatctgactatgagttaaagaaggagttgtcaacagtgtggcccagcctctct
caaaagaccatggatctgttggtgacgccacataaacacaatgaactgacggtagggaag
gtttatgcggccctgatgatcttcgaatactataagcagaatcgagccaggaggctgcag
cagcagcaacagggcacatcaggctcccagtgcaaggtcggggctctgtttaagccattg
ctgcctctgactcacatgcaggagaaagatctgcctatgatgttaaacagtgtggagcct
cccagcatgcttcagccccagcccaaatcccatgccaagtcccagccacagaccagacct
agctccaactccctcaacaatggaggcacactgcaaggccatgatcacaacatcaaggca
tcatcttcttgggtgatggagaaacccaaggaagcaccccgagctaagaccaagagaacc
atgtccaggggcccatctgaggacacaccagacactgccatcattcaggagtcggtggag
atgagcgagatggagaccagtgccagcagtacaatcccagttcctggctcaggtctggag
aaccagggcagagctgcctctatgcctcgactcaatgctgagctgcagcggagccactca
cggcactctccagggatccatctagcttctgtccctgatgccagccctatgaaacgctca
gcttccactgcggccccgcagcggccccaagaggtcaacctgcgggactacaccctggag
aaacccagccaggaccgaccccaccaccatcaccatcaccaccgctgccaccatcgcaga
gacagggacaaagataaatacagagagaagaggcagaggtctttggatgcacctctgggt
ggacaaccacctagctctgctggtgcaacagaagatccagagtctgacccagctgcctcc
agagagcgagcccgtgaccgtggacgctcccacgacagaaaacaccactcctcggtggac
aagcagcgctactactcctgcgaccgctactgcagtcgggaacactgccacaccaaatct
gccaccaccagctgtgtcgcctcccccagcgaggggcaggaaaccagcaccaagcagggc
agtggttgggttaaaggaagcccagtggcactgagctccagttctagcacaccaagccgc
ggacgtcggcagctcccccagacccccctcaccccgcggcccggggtggcttacaagact
gccaattcatcccctgtgcactttgtgtccagccaggcctctctgagtcctggccgactg
agccgcggccagtcggagcacaataccttccggcaaagcggctcccaccactttccctgc
cccgtcactcgtatcagctccgagcctttcctgggccagggccacggtgaggacctgggc
agactctacggcagcctccgtgaccagctggacgtctttcaggatgcggtgtcacggtcg
cccagcccctgtgccgggcactcatctcggaccgcactgcctcgcatgatgggagccctg
ctacctgctccgcagcagaaccttagggtgcccaacgggtaccacttcagctttgggggc
agaaccagcccaggctctggcgtcagggcacccaggtattaccaggaggccgaggaggac
gaatggtgctag
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integrated database retrieval system
