Perca flavescens (yellow perch): 114555422
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Entry
114555422 CDS
T07494
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pflv00535
]
114555422
00536 Glycosaminoglycan binding proteins [BR:
pflv00536
]
114555422
04091 Lectins [BR:
pflv04091
]
114555422
Proteoglycans [BR:
pflv00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
114555422
Glycosaminoglycan binding proteins [BR:
pflv00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
114555422
Lectins [BR:
pflv04091
]
C-Type lectins
Lecticans
114555422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
114555422
NCBI-ProteinID:
XP_028433627
LinkDB
All DBs
Position
1:39509007..39533666
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AA seq
1476 aa
AA seq
DB search
MDRQLLLIFSTDPEDVLSVSIPLEEPQRPLLGATLLLPCYFEDHTVPDPGAPTIAPLAHR
IKWSLVTKEKVTTILVALEGQVRISESYLDRVHLVGYPMTSTDASIKISELRSNDTGVYR
CEVQHGIEDNHDIVHVQVQGMVFHYRAIMGRYTLTFEKAKTACTQNSAVMASPEQLQAAY
DGGFHQCDAGWLSDQTVRYPIHDPRVNCYGDKEELPGVRTYGVRDLNETYDVYCFTEKMT
GRVFYTAAAEKFTFNEAVVACSNQGAQLATTGQLYLAWQGGMDVCNAGWLGDRSVRYPIN
IRRPQCGGGLLGVRTVYLHTNQTGYPLPESRYDAFCYTESPDEEGSGITEEGSGVLSVTT
VTQSPEVFFRRTTTESEAIGELETQQPTVVDFTFTESPTWLPLPQPPNITEFITDLIEAA
TTRPDTGREPSKGFVMPPTGVVFHYRSGSSRYAFTFVEAQLACQSVGASMATPEQLQAAY
EAGYHQCDAGWLLDQTVRYPIVFPRHKCAGDLWDQPGVRSYGLRPADERYDVYCYIDGLK
GEVFHVGSAEGFTYDEAASSCQEQNAILASTGELYTAWKMGFDKCRAGWLLDRSVRYPIN
NPRTECGAGKSGVHTVYAHGNQTSYPEVDARFDAYCFRADILLIANETGLNITDIQEALL
NLTSITDLLRPAVPSIVSPIPVDTSGSGSGSAEFGSGSGVDSASGGYSGDLSGSGDRITS
GDLSGSGDQVTSGDLSESGDQVTSGDLSGSGDRVTSGDVSGSGDLSCSGDRVISGDLSGS
GDLSGSGDLSGSGDRVISGDLSSSGDQFTSGESSGSGDLAGSASAELPSGASGFSSADAS
GSALSGEGSGITVVFSGIDSIVSGEGSVSGELQEAGEGSTGMFIFPSSESGSGVLSGSGD
LSEFGSGSGFNPAQSGSSSSASGQFSGMPSGFITNQDFSGFSGLPSGFSSGSASGQSGEL
SGSGDIPILLIDPELFDASTPITNKEYELSGGPVLISCFGDISGSGIHSGSASGSGSGFF
SGVTFVGSGFTDMTVSSSGEQEASGFLLHSSGQESGGHLYSGFGSSGFLSGSGSGMSGSG
MSESGMSGSESSTSGEEGSVTFLTGDFLTEVSGNATLSMELGQGSVEYSGEGSSSSSGFY
SGSGDTRLSAASGTFSGASSGDVPQVVVLPSPSRLAAPPTATPPASVQAPSDGKETDSVE
GGFNPCEPNHCGAASCTVEDGVALCHEVDVCHPNPCANGATCVESADSYKCLCLPSYGGE
HCEIDEQQCEDGWTKFQGSCYLHFSDREVWLDAEQRCRDLNAHLVSIITPEEQDFVNSNA
QDYQWIGLNDKTVENDFRWTDGTPLQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVP
CNYHLPFTCKKGPASCGAPPEVENAHMFGNRREEYPVNAIIRYQCNPGFTQRHPPVVRCK
ADGQWEKPQVECTDVKARKRIQRRSSRSLAASTKLH
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggacagacagctcttgctgatcttttccacagacccggaggatgtgctgagtgtgagc
attcctttggaggagccacagcgtcctctactaggggcaacgttgctactaccgtgttac
ttcgaggaccacactgtcccagaccccggagctcccaccattgctccactcgctcatcgc
atcaaatggagcctcgtcaccaaagaaaaagtcacgactatcctggtggccttggaagga
caggtgcgtatcagcgagagctacctggacagagttcatctggtcggctaccccatgact
tctacggatgctagcatcaagatatctgagttgcggtccaatgacacgggagtctaccgc
tgtgaggtccagcacggcatcgaggacaaccacgacatcgtccatgtgcaggttcaaggt
atggtgttccactacagggccatcatgggacgctacactttgacttttgaaaaggcgaaa
acagcatgcacccagaacagtgcggtcatggcttcacctgaacagcttcaagcggcctac
gatggtggattccaccagtgtgatgctggctggctctctgaccagacagtcaggtacccg
atccatgatcctcgtgtgaactgctatggtgacaaagaggagctgcctggcgtcaggaca
tatggagtgagagatctcaatgagacttatgatgtctactgcttcactgagaaaatgaca
ggcagagttttctacaccgctgctgcagaaaagttcaccttcaacgaggctgtggtggca
tgctccaatcagggagctcagttggccactactggtcaactctacctggcctggcagggt
gggatggatgtctgtaatgccggctggctgggagacaggagcgtccgctaccccatcaac
attcgtcggccgcagtgtggagggggtctgctgggggtccgaactgtttacctccacaca
aaccagacaggatacccacttcctgagtcccgttacgacgccttctgctacaccgagtcc
cctgatgaggaaggttcaggcatcacagaagagggaagtggcgtgctgagtgttaccacg
gtgacacagagcccagaggtgttcttcaggaggacgaccacagagagcgaggcgatcgga
gagctggagactcagcagcctaccgtagtggacttcaccttcacagagagccctacttgg
ctgccgctacctcagccgcccaacatcactgagttcatcactgacctgatagaggcggcc
accacccggcccgacacaggccgagagcccagcaaaggctttgtgatgcctccaacgggt
gtggtcttccattatcgctcaggctccagccgctatgccttcaccttcgttgaggcccag
ctcgcctgccagagtgtcggagcctccatggccacgccggagcagctgcaggcagcatac
gaggctggatatcaccagtgtgatgcaggatggttactggaccagactgtcaggtatccc
attgttttccctcgacataagtgtgctggagatctgtgggatcaacctggagttcggtca
tatggtttgaggccagcagatgagagatatgatgtgtactgctacattgatgggctcaaa
ggagaggttttccatgtgggctccgctgagggtttcacatatgatgaggctgcttctagc
tgtcaagaacagaacgccatactggcctccactggagagctatacacagcgtggaaaatg
ggtttcgacaagtgccgtgctggctggctattggatcgtagcgtccgttatcccatcaac
aacccccgcactgagtgtggagctgggaaatcaggagtacacactgtgtacgctcacggc
aaccagacaagctatcctgaagttgatgccagatttgatgcatactgtttcagagcggat
attctacttattgcaaatgaaactggactgaacatcacagatatccaggaggctctgctt
aacctaacatcaattactgatctgctgaggcctgctgttccttccatcgtctctcccatc
cctgtggatacttcaggctctggctcaggctcagcagaattcggctcagggtctggggtt
gacagtgcctctgggggttactctggagacttgtctggttctggagaccggataaccagt
ggagatctgtctggatctggagaccaggtaaccagtggagatctgtctgaatctggagac
caggtaaccagtggagatctgtctggatccggagaccgggtaaccagtggagatgtgtct
ggatctggagatctgtcttgttctggagacagggtaatctctggagatctgtctggttct
ggagacttgtctggttctggagacttgtctggttctggagacagggtaatctctggagat
ctgtctagttctggagatcaattcacctctggagaatcatctggttctggagacctggcc
ggcagtgccagtgccgagctacccagtggagcgtcaggcttcagcagtgcagatgcttct
ggatcagctctcagtggagaaggatccggcatcactgttgttttttcgggcatcgacagc
atcgtctctggagagggctcagtttcaggagaactccaagaagctggagagggaagcaca
gggatgtttatcttcccttcatctgaatcaggctctggagtgcttagtggaagcggggac
ctctctgaatttggatctggatctggattcaaccctgcacagagtggatcttccagctct
gcaagtggacagttctctggcatgccgtccggtttcatcaccaaccaggacttttctgga
ttcagtggtttaccatcaggattctcctctggaagtgctagtggacagtcaggagagctt
tcaggaagtggagacattccgattttactgatagatcctgaactgtttgatgcatccacc
cctattactaacaaggagtatgagcttagtggaggcccagtgttaattagttgctttgga
gacatttcaggatctgggattcacagtggttcggcctctggaagtggctctgggttcttc
tcgggtgtgacctttgtgggatcagggttcactgacatgacagtgtcatcctctggagag
caggaggcctcagggtttttactccacagctctggacaggaaagtggtggacatttgtat
tctggatttggaagctcaggtttcctctctgggtctggatcgggaatgtctggatcagga
atgtctgaatcaggaatgtctggatctgagtcctcaacaagcggagaagaaggcagtgtt
acatttttgactggggattttttgacagaggtatccggaaacgctacactgtctatggag
cttggacaggggtcagtggagtacagcggagaaggaagcagtagcagcagtggcttctac
tccggcagcggagacacccgcttgtccgcagccagtggcactttttcaggggcttcctct
ggtgatgtgccacaggtggtggtgctgccctctccatccagactggctgctcctcccacc
gcaactccaccagcctctgtgcaggcaccaagcgatggtaaagaaacagattcagtggag
ggtggttttaacccatgtgaacccaaccactgtggagctgcttcatgcaccgtagaggac
ggggttgctctctgccatgaggttgatgtgtgccatcccaacccttgtgccaatggagcc
acctgtgtggagagcgcagactcttacaaatgcttatgcctgcccagctacggaggggaa
cactgtgagatcgatgagcagcagtgtgaagacggttggactaagtttcagggtagctgc
tacctgcacttctctgacagagaggtgtggctggacgcagagcagcgctgccgggacctg
aacgcccacctggtcagcatcatcaccccagaggagcaggactttgtcaactcaaacgca
caggactaccagtggattgggctgaatgacaagacagttgagaatgacttccgctggaca
gatggcactccactgcaattcgagaactggaggccaaaccagccagataattacttcaac
tctggagaagactgtgtggtgatgatctggcatgagaacggccagtggaacgacgtgcca
tgcaactaccacctgccgttcacctgcaagaaaggcccagcgtcctgtggggccccgccg
gaggtggagaatgcccacatgtttggtaacaggagggaggaataccctgtcaacgccatc
atccggtatcagtgcaacccaggctttacccagcgccaccctcccgtggttcgctgtaaa
gcagacggacagtgggagaaaccccaagtggaatgtactgacgtgaaagccagaaaaagg
atacagcggaggagcagcaggagtctagcagccagcaccaagcttcactaa
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integrated database retrieval system