Perca flavescens (yellow perch): 114555462
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Entry
114555462 CDS
T07494
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114555462 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114555462 (usp39)
Spliceosome [BR:
pflv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
114555462 (usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114555462
NCBI-ProteinID:
XP_028433660
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Position
5:complement(18199258..18205367)
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AA seq
518 aa
AA seq
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MVQEAMAHIQAAPRLSVTMVSLKREREVEVDDDDNEDRVPAKMGRGRVLEDRRSRHCPYL
DTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLH
TLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLN
NIKANDYANVVLQAFSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPR
NFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKSSIIAKAF
QGSMRIFSKKLPHPDLTPEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLI
IPQVPLFNILGKFNGNTEKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPT
IVNFPITNVDLREYLTEEAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEM
QDLQVTDILPQMITLSEAYIQIWKRQGSDNGTNHHTGV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaagccatggctcatatccaagcggcccccaggcttagtgttacgatggtt
tctctgaaacgagaaagagaggttgaagtggacgatgatgacaacgaagacagagtgcca
gccaaaatgggcagaggacgtgtactagaagaccgaagaagccgccactgtccttacctt
gacaccataaacaggagtgtgctggacttcgactttgagaaactctgctcaatctctctc
tcccatatcaatgtctatgcctgccttatatgtgggaaatactttcaaggtagaggtttg
aagtcccatgcttacactcacagtgtgcagtttacccatcatgtgttcctgaatctgcac
acacttaagttttactgtctgccagacaactacgagatcattgactcttcactagaagat
atcacgtatgtgctaaaaccaactttcaccaagcagcacattgcggggctggacaagcag
ggtaaactgtaccgagcctatgatggtacgacctacctgccaggcattgtagggctcaac
aacatcaaagccaatgactacgccaatgtggtgttacaggctttttccaatgttccaccg
ttgcgaaactacttcctggaggaggaaaactacaggggaatccgtaggccaccgggggac
attatgttcctcttggtgcagaggtttggtgaactgatgcgcaaactttggaatccgaga
aacttcaaagctcatgtgtcaccacatgagatgctgcaggctgtggtgctgtgcagcaag
aagaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttcttgaat
gctctgcatggtgctcttggaggcacaaagaaaaaatcatcaatcattgctaaagcgttt
caaggctccatgcggatcttctccaagaaacttccacacccagacttgactccggaggag
aaagaggcattgctcgtgacagaggagtaccaggagcagatgtctgagtccaccttcctt
tttctaacccttgacctcccaacagctccactgtacaaggatgagaaggagcagcttatt
atcccacaggtccccctcttcaacatcctgggcaagttcaatggcaacacagagaaggag
tacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactgcctccgtac
ctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaatcccaca
attgtcaacttccccatcacgaatgtagaccttcgtgagtacttgacagaagaagcgcaa
gttacagagaaaaacacaacgtatgacctggtcgccaacgtagtgcatgatgggaaaccc
accgagggagcatacagaatacatgttctgcatcacggaactgggaagtggtatgagatg
caggacctgcaggtgaccgacattctcccccagatgattacgctgtcggaggcctacatc
cagatctggaagagacaaggcagtgacaatggcacaaaccaccacacaggggtgtaa
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