Perca flavescens (yellow perch): 114555504
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Entry
114555504 CDS
T07494
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114555504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114555504
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114555504
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114555504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-RING_10
zf-RING_11
Zn_ribbon_6
zf-C3HC4_4
DUF1272
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
114555504
NCBI-ProteinID:
XP_028433737
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All DBs
Position
5:1470233..1479665
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AA seq
431 aa
AA seq
DB search
MEFITDIHLIIDKTAYEDSGSLMRILQPYSPENKASCYIVRGTYEELEQLTTQLSWRPSF
SPVTRGSTRQQEEHASPHVKPVEVSGVVMAYIEQRCAQELEKIQGNSIAIERQPDPRTVH
YKPSGTVRVIFRSLHGSSHRVRADFVRQRFITFYQRTASDLQCTSVPVGPHDHKELQKRF
PRLLLKPSHRRSEVTVIGPFVHIANLKEFLSQNRPSSSKSPVNKGPAEAPRSRTSGPLST
RSKDPEEEPCPICMEPIATAEKKTLRCKHSFCRDCLKTAFDYKPVCPTCGELYGTLTGTQ
PDGGEMRSTTSSTTLPGYEKYGTIIIHYYIPSGIQKEEHPNPGQPYEGASRTAYLPDSSE
GQRILKLLRRAFDQRLVFTVGRSTTSGRNNMVTWNDIHHKTSTHGGPTHYGYPDPDYLSR
VGDELKAKGIE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagtttatcacagacatccatctcatcattgataaaaccgcttacgaagactctgga
agcttaatgaggattcttcaaccgtacagtcctgagaataaagcttcctgctacatagtg
agaggaacctatgaggagctggagcagctgacaacccaactgtcatggaggcctagcttc
agtcccgtcacacgaggatcaacccgtcagcaggaagagcatgcttcacctcatgtcaaa
cctgtggaagtatcaggggttgttatggcctacattgagcaaagatgtgcgcaagaactt
gagaaaattcaagggaacagcattgccattgaaagacagcctgaccccagaacagtacac
tataaacccagcggcacagtacgggtgattttccgatcgctccatggctcctcgcaccgt
gtccgtgctgactttgtcagacagcgattcatcacattttaccagcggactgcctctgac
ctgcagtgcacatctgtccctgtgggtccgcatgaccacaaagaactgcagaagagattt
ccacgcctcctcttgaagcccagccacagaagatctgaagtaactgtgatcgggcctttt
gtgcacattgctaacttaaaggagttcctttcacaaaacaggccgagctctagcaagagt
ccagtgaacaaaggtccagcagaagctccacgcagcagaacctcgggtcctttatctaca
cgcagcaaagatccagaagaagagccatgtccaatctgtatggaaccgatagcaaccgcc
gagaaaaagactctgcggtgcaagcactcattctgcagagactgtctgaaaacagccttc
gactacaagcctgtgtgcccgacgtgtggagagttgtacggcactttgacagggacacaa
cctgatggaggtgagatgaggtccaccacaagctccacaactctgcctggatatgagaaa
tatggaacaattatcatccattattacattccaagtggcatacaaaaggaggagcatcct
aaccccgggcagccatatgaaggtgcgtcccgtacagcctatctcccagactcctcagag
ggtcaacggatcctcaaactgctgaggcgggccttcgatcagagactggtcttcactgtg
ggtcgctccaccaccagcggcaggaacaacatggtcacatggaacgatattcaccacaaa
acctccacgcatgggggaccgactcactatggatacccagaccctgattatctcagccga
gtgggagacgaactcaaagccaagggaattgaatga
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