Perca flavescens (yellow perch): 114555534
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Entry
114555534 CDS
T07494
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pflv00535
]
114555534
04091 Lectins [BR:
pflv04091
]
114555534
Proteoglycans [BR:
pflv00535
]
Cell surface proteoglycans
Others
114555534
Lectins [BR:
pflv04091
]
C-Type lectins
Others
114555534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
114555534
NCBI-ProteinID:
XP_028433788
LinkDB
All DBs
Position
5:complement(25543825..25574927)
Genome browser
AA seq
2408 aa
AA seq
DB search
MDSVVKNTQKELWLRGLLWWSLLVELASGASFYGDGFVQLKATESSDHNALRIRFRTSST
NGLLFLAAGQTDYFLLELHAGRLQLKLDLGSRELMLQSERGIQLNDLAWHSVEVRHEQHN
ITLTVDKNSHTGAKMPPGSHHDFQIFDGLYVGGSGGLDRLYLPRDPIGFRGCMDEVIFNE
HDLLSSLRPYTGFKNVHEVSLGCSPQFFATEEDPISFFSSRAYISLPTWNTQQEAIFECV
VHTSAKEGILLYNSAREGDFLAVEIQEGLLVAIVGKGGTITELRSLTFINDRKWHSIKLH
FSSKSLELTVDGEIVKSSISSRSKGLHFKGYLFVGGIDDSTRSEVRKVGLVSVSGKRVRG
GSFKGCLKNIEVSGVKTGLSNAVVTKDISVGCEPEKEPEPSTTVIPTSAPGSLFPLVTPT
PSLHMSTIARGLDRKYNSNFVQLKNLVVQEGGRASLEAKHIKLLLDFKKLGIRQSQIMFR
IREQPIRGQIRLDVDQDQEENTFSMLDLWHGRVMYIHGGSEEPDDFFMFSIYSSSKKQVP
DYLKGNKLYRYNITVTPTNDAPELSLPEGNLFVLLENSKKRLTTDILKATDIDSSYTDLA
FSVLGNLNADAGYLEIENNPGKAVTSFSYLDLEELRVYYVHTGVRNSRIVLRVGDGEKVS
NTVVLRVMAVALEYKIANNTGLQIIQGETAILGSKQLAVQTNAVKQVIDIRYDIIEPPQF
GELQRLHSSGEWRPTDSFSQRLLEKERLRYISTFQEIQTSNVTDYFKSKVNVAARETTEI
LFPITVKWVKYHLLRNVMIDMNKVRKVTLDSECLFATAEGVTLSEDDLYFRVLTTPKKGN
LLRDTTVLSKNSTFSQRDITDLRIHYELVDRPYEDTSDRFKFQLVSKHAQSQNYDFRVSI
KADVNSVFIRNDGLSLLEGESKLIMKDDLFAETLSTKDMYYTVISSPKHGKLVRISQSNS
NASYDNILTFSNQDILEERIMYIHDDSETTQDEFTFIASTSQGFKSSIAEDEIGSKEGIF
NISIHLLNDQKPVRVIDKVFHVVKDGQKLLTIEDLRYHDADSDYDDGQLIYTRRGIPMGD
LVLVNDTTHRLFKFQQKDLEEKRVLFIHKGVSTGRFVLFVSDGKHFISSLLDISAHEPFL
KVGKNTGLLVQKGQSVTFSANNFSVISNMDIRDDQEVIFELDEAPKYGGLYRNETKVDSF
SQSDFKDGLISYRHNDSKHLADYFNLTVKAKGLQLTVGVNVKVYLESHQRPPIVLHHNIL
LVEEGKPVKISETKLEVTHEDNLPSEIVFTVKVAPSHGVLRRFVEAGERYIGTKQSPVKT
FTQEDINSGNIQYMQVEPNQVNDTFILDATNGVTDVNGIRMSVDIIPRLIPLQVFNFTLN
EGASKALTQDVLKVTNRHFSGINFLYSLTEPPQHGHIEHSRHPGVAITSFTRRQVEHEFI
YYVHDSSETLADNFTVVANDTGLRKQSAAQMVYIQVSAVNDEPPVITANRVLRVWVSSVT
EIRPEDLRAEDLDTPPEGLHFMVTPPSNGHLALKSAPMKAVLNFTQEHLDQGQLLFVHKG
AMSGGFNFQVNDGVNFTPRQIFSITARALVLSLEKNRPLKVFPGSSTPITNEDLQAVTND
ISNTLNRIITFSVIRQPKLGRLLKRQPDNSTVDISTFTQDMVDKKEVVYMQTPIESVGWE
AMDSMTFSVASPPTSLDSQTFKIDISYENTGPEHNTVLLANTGAEVTEGESVIIDETKLD
ATNLMSKLPTPQRSSHEVWFQVTSLPQHGVIVVGERNLTKEKPNFSQFIVNKYGIVYKHD
NSETTLDSFAFSAWLNSKGKTAQRPQDDTDVVEERFNITITPVNDQPPLLKTKAPSLRVV
QGDTVALRPDNLKVEDLDNPPDDIKFSVISKPNNGYLALEGSLNESIVAFTQAQINNGSV
YFIHDGSSVSGVFYFSVTDGHHKPIYKLFNLEVTEITISLVNYTGLTLEQGKTSVFLTQD
NLAAETNGKNLTIHYQITRPPNFGKLLKDNEDVAQFEQEDLQAGWLSYHMLSLSSAEDSF
EFTVFTSEANLTGQVFNITARPLIKVGKGLRIPNGIAVKLNTSFLNASELANISDSDPIF
EIISHPKYGKVVWTKPKMSRTAVPAESFTFQEVMQEKVALVLNANMTGVQELNDSLVFVL
KADNIQPAKGEFHFTVVPYDSALFPTTKSPVPTTSSVPQTPIQTSRNEAAPPVLSTAFLS
TQQPSKNQQKFKARNRWGNSSRTSIFSTTLGKPTRGTEDFPFRNTPVRVESYPQKTSSPL
LVILPLLALLLLIIIFVVVVVFLRHNRHRKQNTAAQKEPPSTGLPSSQSYQGQPQRSTTV
PTVTVTPLNPSCPGSPVQDRLFTPNQGLAYNTIDSNMLISSWSNGSPSSSSQIIRTTTPT
LQTNQYWV
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggactccgttgtgaaaaacacccagaaggagttgtggctccgcggtctgctttggtgg
tcgcttctggtggagctggcgtcgggagcttccttctatggcgatggctttgtacagctt
aaggcaacggagtcgtccgaccataacgcgctccgcattcgctttcgaacctccagcacc
aacggcctgctgtttcttgccgccggccagactgactacttcctactagagctccatgct
ggtcgcctgcagctgaaacttgatcttggatcgagggagctaatgttacagtcagagaga
ggcatccagcttaacgacctggcctggcactctgtggaggttcgccatgagcagcacaac
atcactctgactgtagacaagaactctcatacgggtgcaaagatgccaccaggctcccat
catgatttccagatttttgatggtctttatgttggaggttcaggaggcctggacagactt
tacctccccagagacccgatcggcttccgaggctgcatggacgaggtgatttttaacgaa
catgacttgttgtcatcactgaggccatataccggattcaagaatgtccatgaggtgtct
ttaggctgtagtccccaattctttgctacagaggaggaccctatcagcttctttagctcc
agggcttacatttctcttccaacctggaacacccagcaggaagcgatattcgagtgtgtt
gtgcatacttcagccaaagagggaattctcctgtacaattcagccagagagggggacttt
ctggctgtagagattcaggaaggtttgctagtggccattgttgggaaaggtggaaccata
actgagcttcgatcccttacattcatcaatgacaggaaatggcattccatcaagttgcat
ttcagttccaaaagccttgagcttacggttgatggagagatagtgaaaagtagcattagc
tctcgttcaaaggggcttcattttaaaggttatctttttgttggaggtatcgatgacagc
accagatctgaagtcaggaaggtggggcttgtctctgtgtctggaaagcgtgtcagagga
ggttcctttaaaggatgtttgaagaacattgaagtcagcggagtgaaaaccggtctctcc
aatgctgtagtcaccaaggatatctcagttggctgtgagccagagaaagaaccagaacca
tcgaccactgtgattccaacaagtgctccaggatccctctttcccttggtgacaccaaca
ccgtcacttcacatgtccaccattgcaaggggcttggacagaaagtataactcaaatttt
gtgcagctcaaaaaccttgtagtccaagaagggggtcgagcatctctcgaggccaaacac
atcaagttactcttggacttcaagaagcttgggattagacagtctcagattatgttccga
attcgggagcaaccaattcgtggtcagataaggcttgatgttgatcaggaccaagaggag
aacaccttcagcatgttggacctttggcatggacgagtgatgtatatccatggaggctca
gaggaaccagatgacttcttcatgttttcaatttattctagcagtaaaaagcaagttcct
gattatctgaagggcaacaagttgtaccgctacaatattactgtgacacccaccaacgat
gcacctgaattgagtctccctgaaggaaacctctttgtcctgttggagaactcaaagaaa
cgcctcaccactgatattttaaaggccacagacattgacagcagctacaccgaccttgca
ttctctgtgcttgggaacctaaatgctgatgcaggatatttagaaattgaaaacaaccct
ggcaaggcagtgacctcattctcatatttagacttggaggaactgagggtgtactatgtt
cacacaggagttcgaaactcaaggatagttcttagagttggcgatggggaaaaggtcagc
aatactgtggttctaagggtcatggctgtagcactggagtataagattgccaacaacaca
ggccttcagatcattcaaggagagacagctatacttggttcaaagcagctggctgtgcaa
accaatgctgtgaaacaagttatagacatccggtatgatatcattgaaccccctcagttt
ggagaactccagagacttcactcaagcggtgaatggaggcctactgactcattttcccaa
aggcttctagaaaaagagcgcctgaggtatattagcacttttcaagaaatccagacatcc
aatgtcactgattactttaagagcaaagttaatgtggctgcaagggaaaccactgaaata
ctcttcccaatcactgtgaagtgggtgaagtaccacctattgaggaatgttatgatagac
atgaataaagttaggaaagtgacactggactcagagtgtctttttgccacagctgaaggt
gtgaccctctcagaggatgacctttattttcgggttctcaccacaccaaagaaagggaat
ctcctgcgcgacaccacagtcttgagcaagaattcaacctttagccaaagagatataaca
gatctaagaatacattacgagctagtcgacaggccttatgaagatacaagcgacaggttc
aaatttcagctggtttctaaacatgctcagtcacaaaactatgatttccgggtttccatt
aaagctgatgtcaacagtgtgtttataagaaacgatggactctcacttctggagggagaa
agtaaacttataatgaaagatgacctgtttgcagagactttgagtacaaaggatatgtac
tacacagtcataagcagccccaaacatgggaagctagtccgtattagtcagtcaaattcc
aatgctagctacgacaacatcttaacctttagtaaccaggatatattagaggaacggata
atgtacatccatgatgacagtgaaacaactcaagatgagtttacttttatagcctccacc
agccaaggtttcaaatcctccatcgcagaagatgaaattggctccaaagaaggaatattc
aacatatctattcatctattaaatgaccaaaagccagtacgtgttattgataaagttttc
catgtagtcaaggatggacagaagttactcactatagaggatttgcgttatcatgatgca
gactctgattatgatgatggccagttgatttacactcgacgtggaatcccgatgggagac
ctagtgctggttaatgacactactcatcggctgttcaagtttcaacagaaggatttggaa
gaaaagcgagttttgttcattcataaaggtgtgagcactggcaggtttgtgctctttgtc
tcagatggaaaacattttatatcgagccttttagacatcagtgcacatgagcctttcttg
aaggtcggcaaaaacactggcctactggttcagaagggccagtcagtaaccttttctgcc
aataattttagtgtcatatcaaatatggacatcagagatgaccaggaggtcatcttcgag
ttggatgaggctcccaagtatggaggactttatcgcaatgaaacaaaggtggattccttc
tcacagtctgactttaaggatgggctgatctcctatcggcacaatgacagcaagcatctt
gcagactattttaatttaacagtgaaagctaaaggtcttcagcttacagtgggagtcaat
gtgaaggtttacctggaaagtcatcagaggccacccattgtgctgcatcacaacatctta
ctggtggaagagggaaaaccagtgaagatcagcgaaactaaactagaggtcactcacgag
gacaacctgccatctgagattgtattcacagtgaaggtagccccatctcatggcgttctc
cggcgttttgtcgaagcgggggagcgctacatcggaaccaaacagtcccctgtcaagacg
tttacccaagaggacattaacagtgggaacatccagtacatgcaggtggagcccaaccaa
gtgaacgacactttcatccttgatgccaccaatggggtgacagacgtcaacggcattagg
atgtctgttgacatcatcccacgcctcatcccacttcaggtgtttaatttcacgctgaat
gagggcgcctccaaggcgctgacccaggatgtgctcaaagtcaccaaccgacacttttct
ggaatcaacttcctgtatagtttgactgagcccccgcagcatggtcacattgagcactct
cgacatcccggtgtggccataacctcttttaccaggaggcaggtggaacacgaattcatt
tactacgtccacgacagcagcgaaaccttagctgacaacttcactgtggtggccaatgac
acgggcctaaggaagcagagtgcagcccagatggtgtacatccaggtttcagctgtcaac
gacgagcctcctgttattacagccaacagggtcctcagggtttgggtgtcttcagtgacg
gagatcaggccagaggatctgagagcggaggacctggacacccccccagaggggctacac
ttcatggtgaccccacccagcaacggacacctggccctgaagagtgcccccatgaaagca
gtgctcaacttcacccaagaacacctagaccagggccagctactgtttgttcacaaagga
gctatgtctggagggttcaacttccaagtcaacgatggtgtgaacttcactcccaggcag
atcttcagcatcactgccagggccttagttctcagtttagagaaaaaccgtccactaaag
gtgtttccaggctcttctactccaatcacaaatgaggatttacaagcagtgaccaatgac
atcagcaacaccttgaaccgcatcattacattcagtgtgattcggcagcctaaactgggc
cgtctgttgaagagacagcctgataattcaacagtggacatctccactttcacacaagac
atggtggacaagaaagaggttgtgtacatgcaaacccccatcgagtcagtgggctgggaa
gccatggactctatgaccttctctgtggcatccccgcctacttctctggacagccagacc
ttcaaaatagacatttcttatgagaatactggacctgaacacaacacagtcctgcttgca
aacacaggtgctgaggtaacagaaggggagagtgtcatcattgatgagaccaagctggat
gccactaacctaatgtctaagctgccgactcctcagcggagctcccatgaggtctggttc
caggtcacatctctgcctcagcatggtgtcatagtggtaggtgagagaaacctcaccaag
gagaaacctaacttctcccagttcatcgttaacaaatacggtatcgtctacaagcacgac
aactcagagacaactcttgattcttttgcattcagtgcatggctaaattctaagggcaaa
actgcgcaacgccctcaagatgatactgacgttgttgaggagcgttttaacattacaatc
acacctgtaaatgatcagccacctttgctaaaaaccaaagctccaagtctgagggtggta
caaggggacacagtagcactccggcctgataatctcaaagttgaagatttagacaaccct
cctgatgatattaagttctctgtgattagcaagcccaacaatggttacctagctcttgaa
ggaagtttgaatgagtcaatagtggccttcacccaagcccaaatcaataacggaagcgtc
tatttcatccatgatggaagctctgtctctggggtgttctacttcagtgtcacagatggc
catcataaaccaatttataaactatttaacctagaagtgacagaaatcaccatttctctg
gtcaactacactgggttgacactggagcaaggcaagacttcagtattcctgacccaagac
aaccttgctgctgagaccaatgggaaaaacctcaccattcactaccagattacaaggcct
ccaaactttggcaaacttttgaaggataatgaagatgttgcgcagtttgaacaggaggat
ctacaggctggatggttgtcctaccacatgctctccctttcctctgcagaagacagcttt
gagttcactgtcttcacttcagaggcaaatttaactggccaagtgtttaacataacggcc
agacctttgattaaggttggaaaaggtttgaggattcccaatggcattgctgtcaaactc
aacactagctttcttaatgcctctgaactagctaatatcagtgatagtgaccctatattt
gaaattatctcccatcctaagtatgggaaggtggtttggacaaaacctaaaatgtccagg
acagctgttccagccgagtccttcacctttcaggaggtgatgcaggagaaggtagccttg
gtgctgaatgccaacatgactggagttcaagagctgaatgactcactggtgtttgtactg
aaagctgataacatccaacctgctaaaggggagttccactttacagttgtgccatatgat
tcagcactttttccaaccacaaagagtcctgtcccaaccacatcatctgttcctcagaca
ccaatccagacttccagaaatgaggccgctccaccagtcctgtctacagctttcctctcc
acccagcaaccaagcaaaaaccagcaaaagttcaaggcacgcaaccgctggggaaactcc
agcagaactagcattttcagtacaactcttggcaaaccaacgcgtggaacagaggatttt
ccctttaggaacacaccagtacgtgtagagtcctaccctcaaaaaacctccagtccgctc
ctggtcatcttaccactactggccctgctgctacttataatcatctttgtagttgtggtt
gtctttctaagacacaacaggcataggaagcagaacactgctgcacaaaaggagccacct
tccactggtcttccaagcagtcagtcctaccaaggtcaacctcaaagaagcacaacagtt
cccacagtgactgtcactccattaaacccaagctgcccaggtagccctgttcaagatcgg
ttatttacaccaaatcagggcttagcttacaacaccattgattcaaacatgctcataagt
tcttggagtaatggttccccttcatcatcttcccaaattattagaaccaccactcccact
ctgcagacaaatcagtactgggtatga
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integrated database retrieval system
