Perca flavescens (yellow perch): 114555578
Help
Entry
114555578 CDS
T07494
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114555578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114555578
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114555578
Protein recycling
Other Rab GTPase associated proteins
114555578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
CSN8_PSD8_EIF3K
YfbU
Snapin_Pallidin
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
114555578
NCBI-ProteinID:
XP_028433874
LinkDB
All DBs
Position
5:18605913..18611695
Genome browser
AA seq
489 aa
AA seq
DB search
MPRLCWARDSGWSSIWKSSTMWTDKQRGIRVSQEELLCKNACGYYGNPVWQGFCSKCWRE
KARTAGASRQDTRPSNDGTPLTFSKFEVKKSTEKGRRINTMRRLFWGSPSPPKRQESSES
HANVLKAYQSLEPGDFTGFLKILKSPSSQRLQSRCTAFLNTMEAYHDLPVQKLSDLVQDF
YQSFAEYFSGFPEAQVTQIMEHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWI
TPQMLSVPFPDKKTTVTADPFLPAITAIIEMDAKRAPQDKLACVSKCSQHVFEALSTSNS
EPANADDFLSGLVYVVLKANPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFID
KLDGPALNLSPEEFEGYMLRQRAPREGKRQQVASDAQHLLEELTGRQEKLDQGMDALNMQ
LQTWVKAVHSQLDEATAQFALVQKEITAQAEISQVFSSSSQDASPQGDEKDESVLAFTDQ
HAGPQATDC
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttgtgttgggcacgtgattctggttggagtagtatatggaagagctctaca
atgtggacagataagcaaagaggaatcagagtttctcaggaggagctgctgtgcaagaac
gcctgtgggtattatggaaaccctgtgtggcaaggcttctgctccaagtgctggagagag
aaagcacgaacagctggagcctcgaggcaagacacaaggccgagcaatgatggaactcct
ctcaccttctccaaatttgaggtgaagaaaagcactgagaaaggtcgtcgaattaacaca
atgagaagactcttctggggcagcccatcacctcctaaacgtcaagagtcttctgaaagc
catgcaaatgtgttgaaagcttaccagagcctcgagcccggggacttcactggtttcctg
aagatactgaagagcccttcctcccagcgcttgcagtctcgatgtacagctttcctcaac
acaatggaggcgtaccatgatctgccggtacagaagctgtctgatcttgtgcaggatttc
taccagtcttttgctgaatattttagcggttttcctgaggctcaggtcactcaaataatg
gagcatgtagagaaattaataatgacacggttgcacaaatgggttttctgccatgacagc
tgtgatgatgaacagaaggatctggctcttcagagaaggatacgatctttgaattggatc
accccgcagatgctgagcgtaccttttccggataaaaagaccacagtcacagccgacccg
tttctgcctgctattacagccataattgaaatggatgccaaacgagcacctcaagacaaa
cttgcatgtgtgtccaaatgcagtcagcacgtttttgaagcgctctcaacctcgaacagt
gagcccgctaatgctgatgacttcctgtcaggcctggtgtatgtggtgctgaaggccaat
ccacctcgcctgcactccaacatgcaatatgtgatacgttttggtctccctcacagcctg
atggcaggagagagcggctactatttcacaaatttgtcttgtgcagtggccttcattgat
aagctggatggaccagcactcaacctcagtccagaggagtttgagggctacatgctgcgt
cagcgtgctccccgtgaaggaaagaggcagcaggttgccagtgacgcacaacatctgtta
gaggagctaacaggcagacaggagaagctggaccaagggatggatgctctcaacatgcag
ctacagacgtgggtcaaagctgttcattcacaactggatgaggcaacagcccagtttgct
ctagtacaaaaggagataacagctcaggctgagatctcacaggttttttcatcctcatct
caggatgcatcaccgcaaggggacgagaaagacgagtcagtgctggcctttacggatcaa
catgcaggtccacaagctacagactgttag
DBGET
integrated database retrieval system
