Perca flavescens (yellow perch): 114555683
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Entry
114555683 CDS
T07494
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114555683
Membrane trafficking [BR:
pflv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114555683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
PH_13
C1_2
DUF6158
Ank_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
114555683
NCBI-ProteinID:
XP_028434058
LinkDB
All DBs
Position
5:25164461..25204147
Genome browser
AA seq
1812 aa
AA seq
DB search
MELSRRKVPLYGQAKVFALLEGLDPVPEDAEVYVVLEGSTLVHVTMAQSDVMLCFIVPGH
NLAEVVSVQAYLCSETTPLTWVGGASLEYVQDDAQDLAEHLVIHGHCLSSTDHKELSSLF
NLGQQSSRWAIDRRVALAMANLDIPPNWNVLGSHCGDEHSLRESPLHLAVRWGLYRLAEL
LLCQPGGLMAVSLPNEEGVTPLQLAQTAGSTELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDTGNLTLTVRQNLRWSSEESRHADILLLRDRLRDEDFLRELKALRRERVETILV
KNVENALYSDMNGAAVEKHDYEEPLMFCLIEEDEEDDPSQSYSEKSQSIRESQAPSPTLA
AAARLSAMIHGKDRVYANAMLVDQVDEADIKYRSPGEEEVSPAPHLGSPTWDSFSMTPPD
SGNCSHQHPSSPYNGERGIEGPGLENHKEPSPCISPPSPFASSPSFPSSPLAFAFRLFEG
AQRHPMQPFLPVSPALNRRGYSLTEASRGLSPSLECDSGEEDLLVRSYPCSSVKKQSILR
SSSGEERDSFDTSPDFNHTHSDSTHTSSKNPEDAEVRLRSYSYSSPKAKPSRPLLNRDAT
ITDLAEEQRAFSPTESTREKRVLGFRKRAQSAEEESSPSLQHLTLTEFLKEIEDEELDKY
IIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKVKGKEVKEGKEKSGAANGHQFVPVSPSG
PALCVACDKSVSGKELLQCSSCFLNVHKNCRESVAACGKKPPERNALLTKSKTLSLPQNS
VKDNSPASIFSSSSTLPTTTREKRETVAPLSKSLSISIDSRRLSDAAGVDSECSVTACTN
SSLSDEGTVVPATPPSAEPPITTHDAVDAPLMSDLSADLLGLEVESWSLAVSPEFCRQHD
RRTIKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEELQLDGDCVARIFPCLDPLLLFH
RNLFGALQERRQASTQPENPRNYLIHQIGDILLQQFSDEHAEKMKQVYGEFCSHHTEAVN
VFKELQQQNKKLQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERILHYTQEGSQ
EHSDLSSAVAQIREVIAAVDLTVNKYERCQEMQEVLARLENKSFAKLKNDKVFRKQDLHS
KHRELHYKGLVYWKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPPVIPLQKLI
VREVANEERGMFLISASSLGPEMYEVHTTTRDERNAWMRHIRQAVESCPEEEEEEEQRNA
ETEEARRVAEVRVQKITKFQETLLGQDQQICNSLEEKLQLYAELMELTLRSPEPVPHRHL
LVQADTDSETPRQVSSLLTAAVREAENLITILQARDGLTVKGPSSPVQGPECCSYNSHGS
SIQESPSEPDYLSTLSMSSTSLGSDSELTGLDSVLWSSAVELRRGDTKGTLLKVAESVQS
LTQLLYSLQAAVTLQDSCYEVQKLLLQEGERPPLRTLTSLQNSLEQEKQRSIDKKKEEVE
KKGLERKKDKVDEMKKLHVKVRQEQQRWDKECLAREKQQCEQDSVLAQREQQCLLEAERL
RCEREELNAQLLEYQQNLDRLREGQRSVEREKEKIEAQQRLLQTWRHNRQSSLPVTIQMD
GYKVSSHSRSGSLDANCSVYKNEVALLSSLQQNHIHQPANNNQHQCLLSAPINNHDSPLN
SSSYTANIGLSASLYNSLNTLLSQAHSKQPPDGLTYPNYSNNHGCPRPLNDTIHPFSSRV
TAQPQKTNNTDFSPPLDRRSLGPWRSEVTGHRLYEDVYSSSLSLTPLLPPQAYLSLEGQN
GEEGSEENIVYL
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaaagtgcctctgtatggccaggcaaaggtatttgcattgctg
gagggtttagaccccgtgcctgaggatgcagaggtctacgttgttttggaaggatccaca
ctggtccatgtcaccatggctcagagtgatgtaatgctctgctttatagtgcctggacat
aacctggctgaggtggtctctgtccaggcctatctgtgctctgaaaccacacccctcacc
tgggtgggcggagcttcattggagtatgtccaagatgatgctcaggacctggcggagcac
ctggtgatccacggacattgcctgagctccacagatcacaaggagctgagcagcctcttc
aacctgggccagcagagctctcgctgggctatagatcgccgcgtggccctggccatggcc
aatctggatatccctccaaactggaatgtactggggagccactgtggagacgagcacagt
ctcagggagtctcccctccacctggccgtgcgatggggtctgtatcggctggcagagctg
ctgctttgtcagccggggggtctgatggctgtcagtctgccaaacgaagagggagtcaca
ccgctgcagctggctcagacagcaggcagcaccgagctcctggagctgctcacacaccca
ccaaaccctctagccacgcctccagcaggtctgtctcaggtgtgggcagaccggtcccgc
ttgctgaggttctgtcatgatacggggaacctgactctgaccgtccgacagaacctgagg
tggagctcggaggagagccggcacgctgacatcctgcttctcagagaccggctcagagat
gaggacttccttagagagctcaaagctctgaggagggaacgggtggagaccatcttagtg
aagaacgtggagaatgcactgtattcagatatgaatggagctgctgtagaaaaacatgac
tatgaggagccgctgatgttttgcctgattgaggaggacgaggaggacgatccatcacag
tcttactctgagaaaagccagtccataagggagagccaggccccatccccgactctggct
gcagccgccagactgtcagcgatgatacacggcaaagacagagtgtacgctaatgctatg
ctggtggaccaggtggatgaagctgacattaaataccgctctccaggggaggaggaggtg
agccctgcaccccatcttggcagccctacctgggactccttctccatgactccccctgac
tcagggaactgctcccaccagcacccatcatcaccctataatggggagaggggaatcgaa
ggccctggcctggagaatcacaaggagccatccccttgcatctcccccccctctcccttt
gcttcctccccgtcttttccttcctcccccctggctttcgccttccgtttgttcgaggga
gcacagaggcatccgatgcagccatttctgccagtttctcctgctttgaaccgcagagga
tacagcttaactgaggcgagccggggcctgagtcctagtctcgagtgtgacagtggagaa
gaagacttactggtacgctcctacccctgctcatctgtaaagaagcagtccatcctgcga
tccagctcaggagaggagagggactctttcgacacgtcaccagactttaaccacacacac
tctgacagcacgcacacgtccagcaagaacccagaggacgcagaggttcgcctgcgctcc
tactcctactcctcccccaaggcgaagccgtcacggccactgctaaacagagacgcaacc
atcactgacctggcagaagagcagagagcattcagcccgactgagtctaccagagaaaag
agggttttgggtttccgtaagcgggcccagtcagcagaggaggagagcagcccatcgctc
caacacctcaccctcacagagttcctcaaagagatcgaggatgaggagttggataaatac
ataatcccgtctaaggtcgaatcagagaagtacaaagtcagccggaccttcagcttcctc
aagagcaggatgtccagcactcgcaacaagaccaaggtgaaggggaaagaggtgaaggag
ggaaaggagaagtcaggagctgctaatggacaccagtttgttcctgtgtctccatctggt
cccgctctctgtgtggcatgtgataagtctgtttctgggaaggagctgttgcagtgctcc
agctgtttcctgaatgtccataaaaactgccgagagtctgttgcagcctgtggaaagaag
ccgccggagaggaatgcattgctgactaaaagcaagaccttgtctctcccacagaactct
gtgaaagacaactctccagcctccattttctcctcttcgtctacacttcccacgacgacc
agagagaagagagaaacagtcgcccctctctccaaaagcctctccatctcgatagacagc
agacggctgagtgatgcagcaggggtcgacagcgagtgcagtgtgacagcttgcactaac
agctcattgtctgatgagggaacagtggtcccagcgactcccccttcagccgagccgcca
atcaccacacatgatgctgttgatgctcctctaatgagcgacctgtcagctgacctgctg
ggacttgaggtggagtcatggagtctggctgtcagtccggagttctgcaggcaacacgac
aggcgcaccattaaacgacaagatgttatttatgagctgatgcagacagagcttcaccac
atccaaaccctgacggtcatgtcggaggtgttcaggagaggcatgctggaggagctgcag
ctcgacggtgactgtgtggcccggatattcccctgcttggaccccctgctgctgtttcac
agaaacctctttggagcactgcaggaacgccgacaggcttcgacccaaccggagaacccc
cggaattacctcatccatcagattggagatattcttcttcagcagttctcagatgaacat
gccgagaagatgaagcaggtgtacggagagttctgcagccatcacactgaggccgtcaat
gtcttcaaagagctgcagcaacaaaacaaaaaactgcaaaactttgtcaaacaacagagc
aacaacactctggtcagacggagagaggtgcctgaatttatcctgctggttactcagcgc
atcaccaagtacccagtgctgctagagaggatattacattacactcaggagggaagtcag
gaacactctgacctgtcaagtgctgtggctcagatccgtgaagtcattgctgctgtggac
ctgactgtgaataagtatgagaggtgtcaggagatgcaggaagtgctggcccggctggag
aacaagagctttgctaagctaaaaaacgacaaggtgtttcgtaaacaggatctgcatagc
aaacacagggagctgcattataaagggcttgtctactggaagactgccacaggacgtctg
aaagatactttggctctcctgcttacagacgttctggttttcctacaagagaaagatcag
cgctttgtatttgctgctgtggaccagaagcctcctgtaatccctctgcagaagctcatt
gttagagaggtagccaatgaggaaagagggatgttccttatctccgcctcctcattggga
ccagaaatgtatgaagttcacaccaccactagagacgagaggaatgcgtggatgagacac
atacgtcaagctgtagagagttgtcctgaggaagaggaggaggaggagcagcgaaacgct
gagacagaggaggccaggagagtggcagaagtgagagttcagaagatcaccaagttccaa
gagacactgttgggtcaggaccagcaaatctgcaacagccttgaggagaagttacagctt
tatgcagagcttatggagttaactctccgttcaccagaacctgtaccacatcgccatctg
ctggtacaagcagacaccgacagtgagacaccacggcaggtctcatcactgctcacagct
gcagtcagagaagcggagaacctgatcaccattctgcaggctcgtgatggccttaccgta
aaaggtccgagctctccggtccaaggaccagagtgctgcagctacaacagccacggcagc
agcattcaggagtctccctctgagccggattatctgagcacgctcagtatgagctccacc
tctcttgggtcagacagcgagctgacggggctagacagcgtgttgtggagctctgctgtc
gagctgagacgaggagacaccaaagggacactgttaaaggtggcagagagcgttcagagt
ctgactcagcttctctatagtctgcaggctgctgtgaccctccaggacagctgctatgaa
gtccagaaactccttcttcaggagggagaaagacccccgctccgaaccctcacttccctc
caaaacagtctggagcaggagaagcagaggagcatcgataagaagaaagaggaagtagaa
aaaaagggtttagagaggaagaaagataaggtggatgagatgaagaaactccacgtgaag
gtgagacaggagcagcaacgctgggacaaagagtgtctggccagagagaaacaacaatgt
gaacaggacagtgtgctggcgcagcgggagcagcagtgcctcctagaggccgagcgtctg
cgctgcgagcgtgaggagctgaacgctcagctgctggagtatcagcaaaatctggaccga
ctgagggagggccagaggagtgttgagagggagaaggagaagatcgaagcccagcagcgg
ctactgcagacctggagacacaaccgccagagcagcctgcccgttacgatacaaatggat
ggatacaaggtgtccagccacagccgctcaggcagcctggatgctaactgttcagtgtac
aagaacgaggtggctttactttcctccctccagcagaaccacatccaccagcctgccaac
aacaaccagcaccagtgtctgctctctgctccgattaacaaccatgacagccctctcaac
agctccagctacaccgctaatatcggccttagtgccagcctctacaacagcctcaacacc
ctgctgagccaggcacacagcaaacagcctccggatggtctgacatacccaaactacagc
aacaaccacggctgcccccggcctctgaatgacaccatccaccccttcagcagcagggtc
actgcacagccacaaaagaccaacaacacagacttcagcccaccgttggacaggcgatcc
ctaggtccctggaggtcagaggtcacaggtcacagactttatgaggatgtctactcctcg
tctctctctcttacacccctccttcccccgcaggcctacctctctcttgaaggacagaac
ggggaggagggaagcgaggagaacattgtttatctctga
DBGET
integrated database retrieval system
