Perca flavescens (yellow perch): 114556106
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Entry
114556106 CDS
T07494
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03030
DNA replication
pflv03410
Base excision repair
pflv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114556106 (pole)
03410 Base excision repair
114556106 (pole)
03420 Nucleotide excision repair
114556106 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflv03032
]
114556106 (pole)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114556106 (pole)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114556106 (pole)
DNA replication proteins [BR:
pflv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
114556106 (pole)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
114556106 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
114556106
NCBI-ProteinID:
XP_028434764
LinkDB
All DBs
Position
5:complement(17083969..17099421)
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYKAERGQGGGDQENQDDGSSMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYISTKKNCEREVISYM
SRKFQGKVAKLEVIPKEDLDLPNHLVGLKRSYIKLSFSTVDELIKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGNVTSAEEDGMSKNISDQLDNILDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLNMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLEQVTNFDEV
CEEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGQIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHE
KKRLADYCKRAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDRGDAAEIKRCINMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVEPASVTYNVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGTSLEEVYASVAKVADYWLDVLYS
KAANMPDTELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAADIEDFGMPARPLQPAILISTKRKRASQGEDSQVESQDVELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKERKKKRRLLDGEAQPVGGGVIRGGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGHDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLTNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DAKAINRALQRILLNYKEERRGPTLIAVQSNWDLRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYFHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDERGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMISGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRL
GSTVVYGNFNRIMLCTKKRRIDDAIGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSIMYGEEGAQQKKKSRGEGDEEGSDDEDEDEAVVEEDEGDGETDEVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVNQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSGEAQFCDPCNSYILP
EVICHHCNFCRDLDLCRDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVEALKKKLMSY
TLQDLVCTKCKGVKEANMPLYCKCAGDFDLTFPAKSFFEQITVFRNVASHYKMSFLDETL
DWLLVMSPQISQNAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggtacaaagcggagcgaggacaaggtggaggagaccag
gaaaaccaggacgatgggtcttccatgtcggccctcaagcggctggagcgcagccagttc
accgacgagatggacgcccgcttcggtttcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctaccgagatcctggatgatgacaagaggatgatcagt
gctgtggactattatttcatacaggaggatggaagcaggtttaaggtggcccttcccttt
aagccatatttttacatttccactaaaaagaactgcgaaagagaagtaatctcatacatg
tctaggaagtttcaaggaaaggtggcgaagcttgaagttatcccaaaagaggacctagat
ctgccaaaccatctagttggactgaagagaagctacatcaagctttcattcagcaccgtg
gacgagctcatcaaagtcaagcgtgagatctcgccggctgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacctcaatgttatcaagtgccttatcgggtggcaatgtg
acctcagcagaggaagacgggatgtcaaagaatatttccgaccagttagacaacatattg
gacatgagagagtatgatgtgccctatcatgtgcgattgtccattgacctcaagatccac
gtggctcactggtataatgttcgatacagaggcagcgcctacccaccagagattgtacgg
agagatgatcttgtggagcgccccgaccctgttgttttggctttcgacatcgagaccacc
aaacttccactgaaattcccagacgcagaaagtgatcagattatgatgatctcctacatg
attgatggacaggggtttctaatcacaaacagagagatcgtctctgagaacattgaagat
tttgagttcactcccaaaccggaatatgaagggcctttcaccgtttttaacgaagatgat
gaggcggctctcattcagaggtggtttgatcacgttcaagaaaccaagcctaacatcttt
gtaacctacaatggtgacttctttgactggccttttgttgagactcgggccgcccttcat
ggattgaacatgcacagggagatcggtttccagaaggataaccagggagagtacaagtcc
agtcaagctatccacatggattgcttaaggtgggtaaagagagacagctacctgcccgta
gggagtcataatctgaaggcagcagcgaaggctaaattgggctacgacccagtggagctg
gacccggaggagatgtgtcgcatggcaactgaggagccgcagactttagccacctactct
gtgtcagatgctgtggccacatattacctgtatatgaaatatgttcaccccttcatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggacc
ttgtgtgaagctctgctgatggtgcaggccttccacgcaaacatcgtcttccccaacaag
caggagcaggtctttaacaaactgacagacgacggtcacgtcatggactctgagacgtac
gtcggcggccacgtggaggcgctggagtcaggagtgttccgcagtgacatcccctgccgt
tttaagatgaacccagctgcgtttgacttcctgttgcaaagagtggagaagaccatgcgc
catgccattgaggaggaggagaaaatccctttggagcaagtcaccaactttgatgaggtt
tgtgaggaaatcaaaaagaagctgacttcgctgaaggaggtcccaaacaggattgaatgc
ccgctcatctaccatctggacgttggggcgatgtaccccaatattatcctcaccaaccgc
ctgcagccttccgctatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgccacctgccagaggaggatggcctggcaatggagggggcaaatcatgcctgctagc
cgcagtgagttccaccgcatccagcagcagcttgagtctgagaagttcccgccatttttc
cccaacggtccgcctcgggctttccacacactcaacagagaggagcaggccaaacatgag
aagaaacgtctggcagactactgtaagagggcctataagaagacacacgtcacccggctg
gaggagcgagtcaccaccatctgtcagagagaaaactccttctatgtcgacaccgtaaga
gccttcagagatcgtcgttatgaattcaaaggactccacaaggtgtggaagaagaaactg
tcggcagctcaggacagaggagacgctgctgagataaagcgctgcataaacatggagatc
ctgtacgattctcttcagctggcacacaagtgtattctcaactctttctacggctatgtc
atgcggaaaggggcgcgctggtactccatggagatggctggcattgtgtgctacactgga
gccaacatcatcactcaggccagagagctcatcgaacaaatagggaggcccctggagttg
gacactgacggtatctggtgtgtcctgcccaacacctttcctgagaactttgtggtgaaa
accagcaatgagaagaagcccaaggtgaccatctcttacccaggggccatgctgaacatc
atggtgaaggagggattcaccaacgatcagtaccacgagctggtggagcccgcgtccgtc
acctacaacgtcaggtcggagaacagcatcttctttgaggtggatggaccgtacctggcc
atgatcctgcctgcctccaaggaggaagggaagaagctgaagaagaggtacgctgtgttt
aatgaggacggctctctggctgagctgaagggatttgaaatcaagagaagaggagagctc
cagctcattaagatttttcagtcgtcagtgtttgaggcttttctcaaaggtacctctctg
gaggaggtgtacgcctctgtggccaaagtggctgactactggttggatgttctgtacagc
aaggctgccaacatgccagatacggagctgtttgaactgatttcagagaatcgttcgatg
tccagaaggctggaggactacggagagcagaagtccacttctatcagcacagctaagaga
ctggctgagttcctgggagaccaaatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaacccgagggttcacctgtcacagaaagagccattcctctggccatcttc
caggcagagcccagtgtgaagaaacatttccttcgtaagtggctgaagatgcccagcctg
catgacttggacatccgctctatccttgattggagttattacatagaaaggttgggtagt
gccattcagaaaatcatcacaattccagcagcacttcaacaggtgaagaatccggtaccc
agagtaaggcaccctgactggcttcacaagaaactcctggagaaaaatgatatctacaag
caaaagaaaatcagtgagctgttcaccagtgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagccgcagacatagaggactttgggatgccagccagacctctgcag
ccagccatactcatcagcactaagcggaagcgggcttctcagggagaggacagccaggtg
gagtctcaggatgtcgagctcactcagtcctggagagagatcctggggccacccccacct
atgggaaagacacgggaggagcgtctagtgtggctgcgttaccataagaagaagtgggag
ctgcagctgaggcagaggaaggagagaaagaagaagaggaggctgctggatggtgaagct
caacccgtagggggaggagtgatccgaggcggacccaccaccggcctgggaagtttcctc
cgcagaacagcacgcagcatcctggacatgccatggcaaattgtgcagattgcagagacc
agtcaccctggtctgtacaagttgtgggctgtgattggacatgacctccattgcatgaag
ctcaacatcccacgtgtcttttatgtcaatcagaaagtcccaaaacaggaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctctaacatagtgtactacctttatgag
tactgtgtgccagaggacatgtaccaggagcacatcaatgagatcaatgctgacctgtct
gccccagacattgaaggagtctatgaaacacaggtcccgttgctgtttcgtgcactggtg
cagctcggatgtgtgtgtatggtcaataaacatgttgtgagggatctggctggcagggag
gctgacacttttgacctggagcatctggagatgaggtctctggcccagttcagctacctg
gaacctgggagtgttcgtcacatgtacctttatcatcacagtcagggtcacaaagctctg
tttggcctcttcatcccctctcagcgcaaagccagcatctttgtcctggacacagtcaga
agcaaccagatgcccaacctgactaacctctatacagctgaacgcactgctctcctggag
aagacaacagaggagctcctgcctccagagaaacacaactttgaggtccgagctgaaaac
gacgcaaaggctattaaccgcgctctgcaacgcatactgctaaactacaaggaggagcgc
cgtggacccaccctcatcgcggtgcagtcaaactgggatttgcggcggttggcagcaggg
atgccggtgcttgaggagtttccagtcgttccagtacatgtggttgatgagatcagctat
aacgtgctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaaccta
gacagctgcctgtcacaggctttcgacatggccaggtatttccatttacctgtggggaac
ttgcctcaggatgtgtccatctttggctcagacttgttcctggcaagacatctacggaaa
cacaaccacctgctgtggctctcacccacagccaggcctgacctcggaggaaaagaggct
gatgacagtcgtctggttatggaaagtgatgagaggggctctgtggagatcaatgctcaa
ggatgctattccacagtgtgtgtggagttggacctgcagagcctggcggtgaacaccatc
ctccaatcacagcatgtcaatgacatggagggcggagctagtctgggtgtcagttttgat
gtgatccagcaggcctcgttggaggacatgatttcagggaaccagggagccagcgctctc
gctagctatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtg
gttggatgggtcagagagatcacccagtatcacaacgtgtatgcagacaaccaggtgatg
cacttctaccgatggctgcgctcccccagctctctgctctatgaccccgcgctgcaccgc
accctgcacaacatgatgaagaaggtgtttctacagttggtttcagagttcaaacgcctg
ggctcgactgtggtgtatggcaacttcaacaggatcatgttgtgcacaaagaaaaggagg
atagatgatgccataggctatgtagaatacatcaccaaaagcatccactccagagaaatc
ttccactctttgtccatctctttctcccgatgctgggagttcctgctgtggatggatccg
gccaactacggtggcgtgaagggcaaactgccctccagcatcatgtatggagaggaagga
gcccaacagaagaaaaagagccgaggggagggagatgaggaaggcagtgatgatgaagac
gaggatgaagccgttgtggaggaagatgaaggtgacggagagacagacgaggtggaggag
ctgattgagagcaactggaacatcatgcagtatcttccccaaactgcctcctgtcagaaa
tacttcctcatgattgtctccgcctacattgcagccgtctaccacagcatgaaagaggag
ctgagacgcaacgctcctggagcaacaccagtcaagagacgtggaggcagccaggcttcc
cagcaggccgtgggggatttgagtgctcttcctggaatgatctccttctctcaggaatat
gtgtctagtgagttgacacagaactttttcaccatcactcaaaaaatccagaagaaagtg
acgggtaccaggagtgtcaaccagccctcagagatgttccccgtccttcctggatcccat
ctgccactcaacaacccagcactggagtttatcaaatatgtctgccaggtcctttcactg
gacgccaacatagtcaaccaggtgaacaagctgaagagagacctcctgcgtctggtggac
gtgggagagttttccggggaagcccagttctgtgacccgtgtaactcctacatcctgcca
gaggtcatctgccaccactgcaatttctgtcgtgacctcgacctctgcagggacccatct
gtggcacaagatggatcagttttgcctcagtggttctgctccaactgccaggcgcagtat
gagacggagtcgattgagatggctctggtggaggctctgaagaagaaactgatgagctac
actctgcaggacctggtgtgtacaaaatgtaaaggagtgaaggaagcaaacatgcccctg
tactgcaaatgtgccggagactttgacctcactttcccagccaagagcttctttgagcag
atcacggtgtttcggaatgtagcgtcccactacaaaatgagcttcctggacgagaccctt
gactggttgcttgtcatgagcccacagatcagccagaacgctcactga
DBGET
integrated database retrieval system
