Perca flavescens (yellow perch): 114556539
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Entry
114556539 CDS
T07494
Symbol
rnf115
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114556539 (rnf115)
04121 Ubiquitin system [BR:
pflv04121
]
114556539 (rnf115)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114556539 (rnf115)
Membrane trafficking [BR:
pflv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
114556539 (rnf115)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114556539 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-C3HC4_3
HypA
Motif
Other DBs
NCBI-GeneID:
114556539
NCBI-ProteinID:
XP_028435311
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All DBs
Position
6:18706478..18715678
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AA seq
340 aa
AA seq
DB search
MPGWRRTAVSSLWRTDVSVCAGLGKMAEAAAVTPHRFFCHCCKGEVNPKLPEYICPRCDS
GFIEEVTEDSSLLEGGANGIDDAATQFAELWHLLLLERPFTTDSDTPDSEPRLPGGRLGG
LSDLGGFGGGPIGGSVPAGLGGPXGGLLGTGEHWGPGRPPRLHSQRRYRSRGSSRPDRSP
AVEGIVQQFLAGLFANSGVPGSSPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTG
PPPAEKEKISSLPTVNISQEQADCCMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLE
MHDTCPVCRKSLNGEDSSSQPPSESPTLSMDPRTQERWSF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctggaggcggacagctgtctccagtttgtggaggaccgacgtcagtgtttgt
gctggtctggggaagatggcggaggctgcggctgttacaccgcatcggtttttctgtcac
tgttgtaagggagaagtaaaccccaaactcccggagtatatctgtccaagatgtgactca
gggttcatagaggaagtaacagaagactccagtctcctagagggtggcgctaatgggata
gatgacgcagccacacaatttgcagagctatggcacctcttgttactggagcggccgttt
acaacagacagtgacacacctgactcagaacctcggctccctggagggcgcttggggggt
ctcagtgacctgggggggttcggaggggggccgattggggggtcagtcccagcaggccta
gggggacctnatgggggtctactaggaactggggaacactggggaccaggacgtccccct
cgcctgcacagccagaggagataccggtccagaggcagcagtagaccagaccgctcgcct
gctgtggaggggattgtacaacagtttctcgctggcctctttgccaactccggagtccct
ggctcatctcccctctcatggacggggatgctgcactctaacccaggggattacgcctgg
ggacagggagggttagatgcagtgataacacagttactaggtcagttggagaacacagga
cctcctccagcagagaaagagaagatctcttctctccctactgtcaatatttctcaggaa
caagcagactgctgtatggaatgtccggtgtgcaaagaggacttcgcagtgggagagccg
gtcagacagctaccctgtaaccacttcttccattcagactgtatagtaccttggctggaa
atgcatgacacatgtccagtgtgtaggaagagcttgaacggagaagacagcagcagccag
cccccatcagagtcccccaccctctccatggacccccgcacacaggagagatggtctttc
tga
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