Perca flavescens (yellow perch): 114556798
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Entry
114556798 CDS
T07494
Symbol
ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
pflv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114556798 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
114556798 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114556798 (ercc3)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114556798 (ercc3)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114556798 (ercc3)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114556798 (ercc3)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114556798 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
114556798
NCBI-ProteinID:
XP_028435646
LinkDB
All DBs
Position
1:17845703..17853415
Genome browser
AA seq
782 aa
AA seq
DB search
MGKKDKGDRDKKSKKRFYEEEEDEEEVVGSESQEAIPAAAGKQVDESSTKLDEYGAKDYR
VQMLLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFMVAIAEPVCRPNHIHEYKLTAYS
LYAAVSVGLQTSDIVEYLQKLSKTSLPDGIVQFIQLCTVSYGKVKLVLKHNRYFVESTFP
DVIQRLLQDNVIRECRLRTADGADTELITEVIYSKSAISKSIEEKGGTSTSQQPSDGQTS
TQQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRND
TVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWMRSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKMGLTATLVREDDKIVDL
NFLIGPKLFEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRMLFYTMNPNK
FRVCQFLIRFHERRNDKIMVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELMFSSKDEQQQLLQKVLAAS
DLDAEEEVVAGEVGGRPQFSRRTGTMSSMSGADDTVYMEYQSRGSKAALGKNIHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaggataaaggagatcgggacaagaagtccaagaagcgtttctatgaggag
gaagaagatgaagaagaggtagtgggcagcgagtctcaggaggccatacctgctgctgca
gggaaacaagtggatgagtccagtacaaaactggatgaatatggagctaaagattatcgt
gttcagatgctgttgaagaatgatcactcttcacgccccctctgggtggctccagatgga
cacatctttttggaagccttctcaccagtgtataagtacgcccaggatttcatggtggcc
attgcagaaccagtgtgccggcctaatcatattcatgagtacaagctgacggcctactcc
ctgtatgcagctgtcagtgtggggctgcagacctctgatattgtggagtacctgcagaaa
ctcagcaagacgtcgttacctgatggcatcgtgcagttcattcagctctgcacagtgagc
tatggcaaagtcaaactggtgctcaagcacaataggtattttgttgagagtaccttccct
gatgtgatccagcgccttctgcaggacaacgtgatccgtgaatgccgtctccgcactgca
gacggagcagacaccgagcttattactgaagtcatctacagcaagtcagcgatttccaag
tctattgaggaaaagggaggtacttccacctcacagcagcccagcgatggacaaacttca
acccagcaggtccccgaggacatcttcagctactatgagcagatggataaagaagaggag
gaggaggaagagactcagactgtgtcttttgagattcgccaggagatgattgaagaactg
cagaagcgttgtattcagctggagtaccccctccttgcagagtatgacttccgcaatgat
acagtcaacccagacatcaacatagacctgaagcccactgctgtgttgcggccctaccag
gaaaagagtctgcgcaagatgtttgggaatggacgtgctcgctccggggtcatcgtgctg
ccctgcggagcgggaaaatctctggtgggcgtgacagcagcgtgcacggtgcgtaaacgc
tgtttagtgttggggaactcctcggtgtcagtggagcagtggaaagctcagttcaagatg
tggtccactatcgacgactcgcagatttgccgcttcacttccgacgccaaggacaagccc
atcggctgctcagtggccatcagcacctactctatgctgggtcacaccaccaagcgctcc
tgggaggctgagagagtcatggagtggatgcggagccaggagtggggactcattatcctg
gatgaggtgcacactatccctgccaagatgttccgtcgtgttctgaccattgtccaggca
cattgcaaaatggggctcactgccacactggtcagggaagatgacaagattgtggacctg
aacttcctaattggacctaaactatttgaggccaactggatggaattgcagaacaacggc
tacattgccaaagtccagtgtgcagaggtgtggtgcccgatgtctccagagttctacaga
gagtatgtggctatcaagacaaagaagcgcatgctgttttatacaatgaaccccaataag
ttccgcgtttgccagtttctcattcgcttccacgagcggcgcaatgacaagattatggtc
tttgctgacaacgtgtttgccttaaaggaatacgccattcgcctcaacaagccttacatc
tatggcccaacctctcagggggaacgaatgcagattttacagaacttcaaacacaacccc
aagatcaacaccattttcatctccaaggttggagacacctcatttgacttgccggaagcc
aatgttctgatccagatctcttcccatggtggatcacgcagacaggaggcccagaggctt
ggcagagtcttacgagccaagaaaggaatggtagcagaggagtacaatgcctacttctac
tcactggtgtcccaggacacccaggagatggcttactccaccaagaggcagaggttcctg
gtggaccagggttacagctttaaggtgatcacaaagttggcaggtatggaggaagaggag
ttgatgttctcctcaaaagatgagcagcagcagctgcttcagaaggtcctcgctgcttca
gacctggatgctgaggaggaagtggtggcaggggaggtgggcggacgaccacagttctca
agacgaacgggcaccatgagctccatgtcaggtgccgatgacaccgtctacatggaatat
cagagtcgaggcagcaaagccgcattgggcaaaaacattcatccactgttcaagcgcttc
agaaagtag
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integrated database retrieval system
