Perca flavescens (yellow perch): 114556961
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Entry
114556961 CDS
T07494
Symbol
u2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114556961 (u2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114556961 (u2af2)
Spliceosome [BR:
pflv03041
]
Complex A
U2 snRNP components
U2 related factors
114556961 (u2af2)
Complex B
114556961 (u2af2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
114556961
NCBI-ProteinID:
XP_028435927
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All DBs
Position
6:17717765..17727913
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AA seq
485 aa
AA seq
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MSDFDEFERQLSENKQVNRHSIPAAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDR
RGDSKERRHRRSSPTSFPQDNAGSRSPHREKKKNKVKKYWDVPPPGFEHITPMQYKAMQA
AGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQ
MRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY
QPLPGMSENPSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLK
AFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTS
INQTPVTLQVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYG
QVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYH
RRDFW
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaattcgaaagacagctatctgaaaacaaacaagttaataggcac
tctattcctgcagctgaaagggacaaagagaaccgccaccaccgccggtcttcctcccgc
agccgtagcagagagaggaaaaggaggagcagagacagggatagacgcagcagagaccgc
cgtggggacagtaaggagcgcagacacagacgcagctcaccaaccagcttcccccaggac
aatgctggaagccgttctccacaccgtgagaagaagaagaacaaggtgaagaagtactgg
gatgtccctcctcctggttttgaacacatcactcccatgcagtacaaagccatgcaagct
gcaggccagatcccagccacagccctcctacccaccatgactccagacggcctggctgtt
actcccacccctgtaccggtagttggcagccagatgacccggcaggcccgccgcctctat
gtgggcaacatcccctttggtatcacagaggagtccatgatggacttcttcaatgcccag
atgcgtttgggtggtcttactcaggcccctggaaaccctgtccttgcagtacagattaac
caggataagaattttgccttccttgagttccgttcagtagacgaaacaacacaggcaatg
gcctttgatggcatcatctttcaaggccagagcctcaagattcgtcgtccccacgattac
cagcccctgcccggcatgagcgagaaccccagtgtctatgtgcctggtacacagccaatt
aatggtgtggtgtccacagtggtgcctgactctgctcacaagctcttcattggcggcttg
cccaactacctgaacgatgaccaggtgaaggagctcttgacgtcatttggccccctgaag
gccttcaacctggtgaaggacagtgctacaggcttatctaaaggatatgccttttgtgaa
tatgttgatgtcaaccttaatgaccaggcgattgctggactgaacggcatgcagctggga
gacaagaagctcctggtgcagagagccagtgtgggatccaagaacgccactctgacaagt
ataaatcagaccccagtgacgctgcaggtgccgggtctgaacagctcagtgactcaaatg
ggtggcctgcccactgaggttctgtgtctgatgaacatggtggccccagaggagctgctg
gatgatgaagaatatgaggagattgtggaggacgtcagggacgagtgcagcaagtacggc
caagtgaagagcatcgagatacctcgacctgtggacggccttgaggtgcctgggaccggc
aagatctttgtggagttcatgtccgtttttgactcccagaaggccatgcaggggctgacc
ggaaggaagtttgccaacagggtggtggtgaccaaatactgcgatccagatgcgtatcac
cgccgagacttctggtag
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