Perca flavescens (yellow perch): 114557189
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Entry
114557189 CDS
T07494
Symbol
limd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114557189 (limd1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114557189 (limd1)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114557189 (limd1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
114557189 (limd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
114557189
NCBI-ProteinID:
XP_028436353
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All DBs
Position
6:23538505..23560913
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AA seq
611 aa
AA seq
DB search
MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDAGNNPDFEETRRVFASKMTKIHMQKQ
QEEIAKNNQAMKMNGGHNSTYYTKDRPPINSYRQPCEAAAKPPILSGPVPGTTAGNQYAQ
FDGQKHHTVIQSELPVGRAYGNNYDNKERSEPYTPPNPGNASHSAPSHARHPVSQSAAWA
ASRESQLSPALSRPGGNRTSQQQPQSQSARPTANSLPPQQNQAVTPSVNQSPPSSAGPAK
AWAGEPSGSAKPDLIHALPLSAFTAGAEFHMQQPSTHSATHYAPSSPNSRSSTSHNGPAA
VSSLLPAPFETTLPKAQVASAALIPGNVSRSSSQGQGQSQIPICGHAVSAEADVLCSPKP
VYLPCESLHSQPPEQWPSAAEIKLEALTNRLEREMDAQPKADYFGVCVKCNKAVYGASKA
CQAMGSLYHDSCFTCSACSRRLRGKAFYYVGGRVFCEEDFLYSGFQQSADKCNACGHLIM
DMILQALGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCAACNQPIL
PSEGSDETIRVVSMDKDYHVECYNCEDCKMELNDEEGHRCYPLNGHLLCHSCHLKHMEPG
RSSPIAAAASY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaagatttaggactcgaggcgagtaagtttatcgaggacctaaacatg
tatgaagcatccagagatggtttatttcgaacgaggagggatgcaggaaataaccccgac
tttgaagagacacgaagagtttttgcctctaaaatgactaaaatacacatgcagaaacag
caagaggagattgcaaaaaacaaccaggccatgaagatgaatggtggccacaacagcaca
tattacaccaaagacagaccgcccatcaatagttacaggcagccgtgtgaagcggcagcg
aagcccccgatactctctggccctgtgccgggcaccacggctgggaatcagtacgcacag
tttgatggccagaaacaccacacagttattcagtctgaacttccagtcggcagggcatac
ggaaacaattacgataataaggagcgctcagagccatatactccccccaacccaggaaac
gcgtctcatagcgcgccctcacatgctcgtcacccggtcagccagtcggctgcctgggcc
gcatccagagagagccagctttccccagctttgtctaggcctgggggcaacagaacatct
cagcagcagccccagagccagtctgcacgtcccaccgccaacagtcttccaccccagcag
aatcaggctgtcaccccgtctgtaaaccagagtccaccctcatctgctgggccagcaaag
gcctgggctggagagccctctggctcagccaaacctgacctcatccatgccctgcctctg
agtgccttcacagcaggagctgagttccacatgcagcagccctccacacactctgcaacc
cattatgcaccatcttctcctaattcgagatcctctaccagccataatggtcctgcggca
gtgtcctcgctcctacctgcaccctttgaaacaactctacccaaagcccaggtggcatca
gctgccttgatccctggcaatgtctcgagaagcagcagccagggtcaaggtcagagccaa
atacccatatgtggacatgcagtcagtgctgaagctgatgtcctgtgctcccccaagcct
gtctatctaccctgcgagtctctccattcgcagccccctgaacagtggccttcagcagct
gaaataaagttagaagccctcaccaatcggctggaaagagagatggatgcccaaccaaag
gctgattactttggagtctgtgttaagtgcaacaaggcggtgtatggagccagcaaggcc
tgccaagctatgggtagcctctaccatgacagctgcttcacctgcagcgcctgcagtcga
aggctgagagggaaggccttctactatgtcggagggagggttttctgtgaagaagacttt
ctgtactctggtttccagcagtctgcagacaagtgcaacgcatgtggacatctgatcatg
gacatgatcctgcaggccctcggcaagtcgtaccaccccggctgtttccgctgtgtcatc
tgtaatgagagccttgacggagtgcccttcactgtggacactgaaaataagatatactgt
ctcaaagattaccacagggttctggcgcctaaatgtgcagcctgtaatcagcccatcctg
ccctcagaggggtctgatgaaaccattcgagttgtatccatggacaaagactaccatgtg
gaatgctacaactgtgaggactgtaagatggagctgaacgacgaagagggtcaccgctgc
taccctctgaacggccaccttctctgccactcgtgccacctgaagcacatggagcctggc
cgctcctctcccattgctgcagctgcctcctactaa
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