Perca flavescens (yellow perch): 114557273
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Entry
114557273 CDS
T07494
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114557273 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114557273 (rad54b)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114557273 (rad54b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
114557273
NCBI-ProteinID:
XP_028436482
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All DBs
Position
6:19834779..19851514
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AA seq
937 aa
AA seq
DB search
MRRSGAPSQLSGNAVKKKRFMPPGASSSYLVPESKPLSPKLGLGNALEKVQKSLAAPAPS
KTEYDAQPKAAQPAPALSRALARVLSAAESKENEAERKHANTGSDEYTEDNRPAAEMSGS
SQTPQPRVGSVCVSGAAGSDSGCSQDGVRYFSVMWCKASKKKHKRWEGDAVLVTRGRTAT
LKDMESKDIGKGSGYKVSELASLSEGESLMVGGKEVEVMGVISAEDFARGRCFQEVQVEK
EEPHAKSAPPPCRRLTSKPFCSPTLLGRADHSGSKPEEEQTCRPRHDPLAPGALVMPRPS
ANHQWSYNKSGLPVVDVVVDPYLTAQLRPHQRDGLLFLYECVMGLRAVGRYGAILADEMG
LGKTLQSVALSWTLLKQGPYGGKPVAKRVLVVTPGSLVHNWGAEFNKWLGRERISVFTLD
QDHRIEQFVLSPLHSILVISYEMLLRSLEQVQKVEFGLIICDEGHRLKNSSIKTSSAISS
LSCNRRVILTGTPVQNDLQEFYAIIDFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEER
VLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSPLQRELYKHLLCHRVFR
ACLQGSTQTHTHLACITALKKLCNHPGLLHGTAKEKADCGSVENSLYEGLVELFPESYSS
GGFNTADSGKLLVLSDLLTSIRQLSPSDRVVVVSNYTQTLDLLQDLCVHVGYTFCRLDGQ
TPTSQRQRLVDAFNSPYSQDFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMAR
VWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKRAEHTSFSTSELRDLF
SLTDTLSLTHDLLNCSCSMDGSVQAVVEEDEQVSERPCQLGRQGDRGGAQQKHLSMSELM
QWRHFSGDTHTFSDPYLDHSRNHITFAFQTTMSHTAL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagccagctctcgggtaatgctgtaaaaaaaaaacgattc
atgccacctggagcatctagttcatatcttgtgcctgaatccaagcccctttcccctaaa
cttggtttaggcaatgcactggaaaaggtccagaaaagtctagcagcaccagctccgagt
aaaacagagtatgatgcccagcccaaagctgcccagcctgctccagccttgtcaagggct
ctggctcgtgttcttagtgcagcggaaagtaaggaaaatgaggctgaaagaaaacatgct
aacactggctcggatgagtacacagaagacaacagaccagcagcagaaatgtccgggtct
tctcaaacccctcagcctcgtgtggggtcagtctgtgtttctggagctgcaggatcagac
tctggctgcagtcaggatggagtgcgttacttcagtgtgatgtggtgtaaagccagtaag
aagaaacacaagcgctgggagggcgatgcggtcctggttacaagaggacgcacagccaca
ctgaaagatatggagagcaaggacattggaaagggaagtggctacaaggtgtccgagctg
gcctccctgtctgagggtgagagcctgatggtcggagggaaggaggtggaggtgatgggg
gtcatttctgctgaggacttcgccaggggacgttgtttccaagaggtccaggtagaaaaa
gaggagccacacgcaaagtcagctccacccccctgtcgtcgcttgacatccaaacctttc
tgctccccaacactgttgggcagagcagatcattcaggatccaaaccagaggaggaacaa
acctgcagacctcgtcatgacccactggctccaggtgcactggtgatgcctcgtccttct
gctaaccaccagtggtcttataacaagtcggggcttcctgtggttgatgttgttgttgac
ccgtacttgaccgctcagctgcgaccacaccagagagacggtctgctctttctctacgag
tgtgtcatgggcttgagagctgtgggtcgctatggggctatcctggctgacgagatgggt
ctggggaagaccctgcagagcgtggcactgtcttggacgttgcttaaacaaggaccttac
ggtgggaaaccagttgctaagcgtgtccttgtggtcactccaggcagcctggtgcacaac
tggggtgcagagtttaacaagtggctgggccgtgagaggatcagcgttttcactttggat
caggaccacaggatagaacagtttgtgttatcccctctgcacagcattcttgtgatcagc
tatgaaatgctgctgcgctccctggagcaggtacagaaagtggagtttggtcttatcatt
tgcgatgagggccacaggttaaagaacagcagcatcaaaacgtcctcagccatcagcagc
ctgagttgtaatcgcagagtcatactaacaggcaccccagtacagaacgacctgcaggag
ttctatgctattatagactttgttaacccggggattctcgggtcatccactgcatatagg
aaagtatatgaggagccgattctacactccagacagccctcctgcacagaggaggagaga
gttttgggagaggagcgggcagcagagctctctcgcctgactggcatgttcatcctgaga
cggacacaggagatcatcaaccgctacctgcctccgcgtctcgactggacgttgttctgc
gagccgtcccctctgcagcgagagctgtacaagcatctcctctgccatagagtcttcaga
gcctgccttcagggctccacacaaactcacacacacctggcctgcatcactgcactgaag
aagctctgtaaccaccccggtctgctccacggcactgccaaggaaaaagcagactgtggt
tcagtggagaactctttatatgagggcctggttgagctcttcccagaatcctactcttca
ggtggcttcaacaccgctgactctggaaaacttctggttctgtcggacttgctaacctct
atcagacaactcagcccttcagacagggtggttgtagtgtccaactatactcagacactt
gacttgctccaggacttgtgcgtacacgtgggctacaccttctgccgacttgacgggcaa
acccccaccagccagagacagcgtctggttgacgcttttaacagtccctactcccaggac
ttcttgtttctgctaagctccaaagcaggtggtgtggggcttaatctggtgggtgcttcc
cacctggtgctgtatgatattgactggaaccctgccaatgacattcaggccatggctcga
gtgtggagagatggacagaagaagacagtgcacatctatcgtcttctcactgcaggcact
attgaggagcgcatatttcagagacaggtgtccaaacagggactttctgggacagtggtc
gacctgggcaaaagggcggagcacaccagcttctccaccagtgaactgcgagatcttttt
agcctgacagacacgctctctctaacacacgacctgctgaactgcagctgcagcatggac
ggctcagtccaggctgtcgtagaggaagacgagcaggtttctgaaaggccgtgccagcta
ggtcgtcaaggtgaccgtggaggggcgcagcagaagcatctcagcatgtccgagctgatg
cagtggagacatttctctggtgacacacacaccttctcagatccttacctcgatcactca
cgcaaccacatcacctttgcctttcagaccaccatgtctcacacagctctgtaa
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