Perca flavescens (yellow perch): 114557429
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Entry
114557429 CDS
T07494
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114557429 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114557429 (trip13)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
114557429 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
Viral_helicase1
AAA_25
AAA_24
NPHP3_N
TIP49
AAA_5
TsaE
AAA_28
AAA_17
RNA_helicase
AAA_7
Cytidylate_kin
NACHT
RuvB_N
ATPase_2
IstB_IS21
AAA_33
AAA_30
AAA_11
ABC_tran
bpMoxR
DUF815
ATPase
SLFN-g3_helicase
Zot
AAA_19
DUF6393
NB-ARC
Rad17
PhoH
Mg_chelatase
PduV-EutP
Sigma54_activat
nSTAND1
NRBF2
nSTAND6
NTPase_1
AAA_3
Motif
Other DBs
NCBI-GeneID:
114557429
NCBI-ProteinID:
XP_028436675
LinkDB
All DBs
Position
6:20884048..20892944
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AA seq
423 aa
AA seq
DB search
MDGDRMEVGNQKQNIHVEVHVKSHSTAKVSEVRIHILALLNRHSMVFGNYRWTEFDEDFL
QKHVESVAIVDLEELVTQPLDLKSCSVSVHIFTLNEDGPSTLSLEEDEELSAANHWLLPA
AEFNGIWESLVYDSGVKTQLLDYVTTTIYFSDKNVNSNLISWNRVVLLHGPPGTGKTSLC
KALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFV
LIDEVESLTAARSACQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAF
VDRADIKQYIGPPSVKGIYNIYLSCLEELMKCQIIYPRQQLFTMFELETMGFAKSEVSEH
SLNLRNIALKSKGLSGRALRKLPFLSHALFVKTPTVTLERFLEAMDQAVDKQTEEKANLV
NGV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacagaatggaggtgggaaaccagaaacaaaacatccatgtggaggtccat
gttaaatctcacagcacagctaaagtgtctgaagtgaggatacatattctggctctgctg
aatcgccacagcatggtttttggaaactacagatggacagagtttgatgaagatttcctg
cagaaacatgtggaatctgtggctatagttgatcttgaggaactggtaacccagcccctt
gatttaaagagctgctctgtctccgttcacatcttcactctgaatgaggatggacccagc
acgctcagtttggaggaggatgaggagctttcagcagccaatcactggttgctgccagca
gctgaattcaatgggatttgggagagtctggtatatgacagtggagtcaaaacccagctc
ctggattacgtcacaacaacaatttacttctcagacaaaaatgtcaacagcaacctgatt
tcgtggaaccgtgttgtgctgcttcacggaccccctggcacaggaaaaacgtcactgtgc
aaagctcttgctcagaagctgtcaatcaggctgtcaagtcggtattcttatgggcaattt
gttgagataaacagccacagcttgttctcaaagtggttctcagagagcggtaagctggtc
acaaagatgtttcaaaagatccaacaactgattgacgacaaagacgctcttgtgtttgtc
ctgattgatgaggtggagagtctgacagcagctaggagtgcttgccaggcgggaacagag
ccctctgacgccatccgagtggtcaactccgttctcactcaactggaccaaatcaaacga
cattccaacgtcgtgatcctgacgacctccaatgtaacagaaaagatagacttggcgttt
gtggacagagctgacatcaagcagtacatcggacctccatccgtgaagggcatctacaac
atctacctctcctgcctggaggagctgatgaagtgccagatcatctacccccggcagcag
ctgtttaccatgtttgagctcgagacgatgggctttgcaaagagtgaggtgtccgaacac
agtcttaacctgaggaacattgctctaaaaagcaaaggtttgagtggaagagcactcagg
aagttaccatttctatcccatgcactgtttgtaaagacaccgacagtgactcttgagagg
tttttggaggctatggaccaagcagtggataaacagaccgaggaaaaagctaacctggtc
aacggtgtctga
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