Perca flavescens (yellow perch): 114557445
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Entry
114557445 CDS
T07494
Symbol
cic
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114557445 (cic)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114557445 (cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
114557445
NCBI-ProteinID:
XP_028436693
LinkDB
All DBs
Position
6:complement(16338551..16378776)
Genome browser
AA seq
2714 aa
AA seq
DB search
MRPLKKHRGRSPPLTRGRGGRRRGGSQPLQEKDPKRVKRETLVKTTQHTPNTLTHKQTLP
TVANSNEEPITNSNTPTMEESTELRKPVESVEKEGKKAEEKTEKEKIVGTNGNSAVATES
VAFPTSSPAPLSTATPPLATNHSPNLGSVSSRKTATFKARVPKKKYTYEHFANNANALTT
IPTSRPAHIHNSYCNINSKISDSVNTPNNNFKNSNNISNSINTSINVSINSSTSSNTTKG
INNMTNSSARSHNTFINSSNSRSNNCSGNQSSVLTVDSRDTEANCFVSTEDKALRTADSQ
AGENESEGAPYSVRSLSTDTASEHSADLDVMEATGQSLHQKNSNYPAPLHNLHHKDASPS
EGLAEVLAKGMKNQRVLARQIKRTMESGVRATGDRGVKEINSCPLLSVFRPGVVRRVSGG
TVEVQLQGEETLVKYPFHGGTVMTSSSGAESTVEFILDAPPPGMAPVAVRTRVCVPFGGE
EGGPLLYREGIITQVDPHPGVSFPYQVLLNEDRETLDNGGVGEEKEKRKANARTVWVSRQ
SLRLLTPPWEVPHLDGGRAKEREREREREERERREEMEVEREVCQLSIGMGVLGGGARLG
HSFSHEGVVGGHPYVNAHPPPHSSTVTSSVGGSTVHGCGDNYSDRERQKQPNTPEEDVEV
SCFNMTLTVDPKPNAGTSQQVNIVSRSGCYPPSSPILSLVRGLEPPPFSTLPTPQPPRSP
ALLVSEMNNTTPNLPPSKTTPTQTPTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDVVCTP
NGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEXQRGGGGGGSSSGTVTP
DLRGRASSEFEWDDTSRESSETGSRGNSRPRLVLPSLLPHDLSSRFDFDECEAATMLVSL
GSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSGTGG
SKVTTPAGGGERERHTSGIQPSFHSNLMFTVPMSPSKRKPDAPPPPPLPSHHHDYTPKTE
LEQGDLNSFRVLSPQTSVSHSRTHTPTFSRPRGVTTPSSSRSPSSTAVSPPPLLVSPTPP
SPLTPDGGPRRVVPVSQQALRDSPVIVRNPEVPLAKFTECPLGRGGGGNEGGTDKTTSTD
IGLTPLTPQPISGLQIPVPINAAAATVPNGTVLLRSPAQTLVLVSPTPSSLPTTDTPDTL
LQALSVTVSTTVTAPAPSSTDSSVEREENRGTGFGGEVQQPVPCHPSPTALLPLILPAEN
LHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGQNPVNHPQ
AASLKTEFHGVAAQSQEPAEAPPILERGPPSRPPPSSDEPPPEKEKGDAERERPDSETES
DVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFMIFSK
RHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNK
DRKKSSSEGRGVPGGKDIRERSMSESTEPHSVELKGVGPGLVGVSERSTGKGHVGQLTRP
RAFSQSAMHSLERSDRGNTQALAELAQMCGDSGSQFSSHAPPLSQSQRGVSEDMTSDEER
MVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDESDRKRVFAPVICSSALSS
SSHHTPHGRSVSLSSYPSSKRYDEGRSGGGGFSDHRRKDRGEGEGGGEVQATSLSLTSGH
SVISTSPAGGHPSSSVGSLGGNPLLGIGAVRVASTVVTNVMRPVISTPLPIASKPRDGGT
SSSPHPPERKSLTPHQQPQFLIGSGSGSGVQAPGGGYYSSSSPNPLGAGVGPGGVVTNLV
LGGTLSAHPAVQLITPSHHPQPCQQQAFSSSAVSVPHSQTNGPLPLSLLHPQFLPASSLA
SPGGKAITQVQYILPTLPANPKSPPQQLSQPTSIFNLPTAPPTHMSLANGKQQGTSSLTG
YTSSSAVGVVSPGTRVQTQSPVLQGKMLVPMATVRTAPAPAQQFPIVAPPLPVQNGAQTG
SKIIQIAPMPVVQSQLPQGGAVHPASPFPVTVGTAAVVAPGSAPSQAVLLPPAPTRITYV
QSTPGVPSTLPLVSTTTGASATQQALPVTGSAYVPSPLATLGFTAIAPPGQTLVQPLIAG
QPPLLATAQSPQPSISAPASASGGQIVTAIYPPSPSVTMATGVVSMTAVPPSVVYSVSSP
SSTSPHILSKYTATPTTITHPHPQPHLDRQADRYLPPDRPADRQTDRQAERQTELPTHSD
RPLERQASTNSSSVAPPSGSAVSIRPCSPPLHIQTPGSTPGTPKLTQLPVRTPQKVKATV
ANIPVGSYEGGGRGKEREREKEREREREREAAATSRFSFDPELAGQTGSPSTHPAEELPS
ADRTLEGSSVPDSSDTQHRESTSTKETGWRDSLPSSPLPPPSATEPSLPPPQTDKDGPTP
KKVKARPPPLKKTFDSVDKVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGS
YRRKRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRAATDGED
ILTDLEFDKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSDIFPTKVCLQ
LKIREVRQKIMQTAAPSDVSGLGIPDSIGNLPGPSSSQSGEGYMRGGGDLQDEDMEQGTE
GSPEDPRDSKDSSR
NT seq
8145 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaagaaacacagagggcgttctcccccattaactagaggcagagggggg
cgaaggagagggggctcacagcccctccaggagaaagaccccaaaagagtcaagagggag
acacttgtcaaaaccacacagcatacacccaacactctcacacacaaacagaccttgccc
acagttgccaactctaacgaagaaccaatcacaaacagcaatacccccacgatggaggag
tctactgagctgaggaaacctgtggagtcagttgagaaggaaggtaagaaggcagaagaa
aagacagaaaaggagaagatagtgggcacaaatggaaatagtgctgtggccactgaatct
gtagcatttcctacctcttctccagcgccactctccacagccacgccccctctggccacc
aatcacagccccaatttaggctccgtctctagtaggaaaacagccacctttaaggctcgc
gtacccaagaaaaaatacacatatgagcactttgctaacaacgcaaatgccctgactacc
attcctacctccagacccgcacacatacacaacagttattgcaatattaacagcaaaata
agtgatagtgtgaatacgcccaataataatttcaagaatagtaacaatattagtaatagc
attaatacaagcattaatgttagcatcaatagcagtactagcagtaacactacaaaaggt
attaacaacatgactaacagtagtgctcggagccataatacttttatcaatagcagtaat
agtagaagtaataattgctcaggtaatcagtcatcagtcttaactgtggatagtagagat
acagaagcaaactgttttgtttccacggaggataaagccctcaggacagcagattcccaa
gctggggaaaatgagtcagagggggccccttactcagtgcgctccttgtccactgataca
gctagtgagcactccgctgacctagacgtcatggaagcaacaggacaaagccttcatcaa
aagaactccaactacccagctcctctccataacttgcaccataaagacgccagtccttca
gagggactagccgaagttctggctaaaggcatgaaaaaccagagagttcttgctcgccag
ataaagaggactatggagagtggggttagggctacaggggacagaggggttaaggagatt
aactcatgccccttattatctgtgttcagaccaggggtggtgcgtagggtgagtggaggt
actgttgaagtccagctccaaggagaggagactcttgttaaataccctttccatggtgga
accgtgatgacatcgtcatcaggggctgagagcactgtggagtttattttggatgccccc
ccacctggcatggcaccggtggcagtcaggactcgagtgtgcgtgccctttggtggagag
gaggggggtcctctgctctacagagaggggattatcactcaggtggacccccaccccggt
gtgtcatttccttaccaggtgcttctaaatgaagacagagagactctggacaatggaggg
gtgggggaagagaaagagaaaaggaaagctaatgctcggactgtgtgggtgtcccgacaa
agtctgaggcttctcacccctccttgggaggtcccacatttggatggtgggagggcaaag
gaaagagagcgggagagggaaagagaagagagggagcggagggaggagatggaggtagag
agggaagtgtgccagttgagtattgggatgggggtgctgggagggggagcaaggttaggc
catagtttttcacatgaaggggttgtaggtgggcatccctatgtaaacgcacacccacca
ccccattcctccaccgtgacatctagtgtaggtggcagcacagttcatggctgcggagac
aactactccgacagagagagacagaaacagccaaacactccagaagaggacgttgaggtg
tcttgttttaacatgaccctcactgttgatcccaagccaaatgctgggacatctcagcaa
gtaaacatcgtctccaggtccggttgctaccccccctcctcccccatcctctctttggtg
cggggtctggaacccccacccttctccaccctacctactcctcagccaccccgttcccct
gccttactggtgtctgaaatgaacaacaccactccaaacctacctccatcaaagaccact
cccactcagacccctactcccacttctggtggggggtcctcctctacctcctctcgctcc
aggactcccctctcattggctcagcagaaatacaagaagggtgatgtggtgtgcacccct
aatggtatccgtaagaagttcaatggtaagcagtggcggaggctgtgctccagggagggc
tgtatgaaggagtctcagcgtcgaggatactgctcaagacacttgtccatgaggaccaaa
gagatggagnnacagcggggggggggaggaggaggcagcagctcagggacagtcacccct
gacctgcgggggagagcaagcagtgagtttgagtgggacgacacatcaagagagagcagt
gagaccggtagcagaggaaactccagaccccgcttggtcctcccctccctcctcccccat
gacctgtcgtcacgctttgacttcgatgagtgtgaggccgccaccatgcttgtgtcatta
gggagctcccgctctggcaccccctccttttctcccatctctaaccagtcgcccttctcc
cctgccccctctccctcaccctccccactgtttggctttaggccggccaacttctcccca
attaccgcctccccagtcctccaacaccggaggcacaggcagcccagcgggacagggggc
agtaaggtaacaaccccagctggaggaggagaaagggagagacacacttcaggtatccag
ccctccttccacagcaacctgatgtttacagtccccatgagccccagcaaacgaaagccc
gacgcacctcctccaccacccctcccctcacaccaccatgattacacacccaagacagag
ctggagcagggggaccttaactctttcagggtgctgtccccccagacatcagtttcacat
tcccgcacacacacaccaactttctcccgacccagaggagtgaccaccccgtcctccagt
aggtcaccgtcctccactgctgtctcccctcctcctctgctggtgtctccaactcctcct
tctcctctaactcccgatggagggcctcgtcgtgtggtccctgtatcccaacaggccttg
cgggactcccctgtcattgtgagaaatcccgaagtcccactggcaaaatttacagagtgt
cccttaggaagaggaggaggtggaaatgagggagggacagataaaaccacatctacagac
atcggcctaacacccctcacccctcagccaatttcaggcctccagattcccgtccccatt
aacgctgctgcagccacagtaccaaatggcaccgtccttttgcggagcccagcccaaact
ctggtgcttgtgtccccgacaccctcctccctgcccaccactgacacccctgacaccctc
ctgcaggccctgtcagttaccgtcagcacaacagtcacagctcccgctccaagtagcact
gacagctctgtggaacgagaggagaacagggggacagggtttgggggtgaggtccagcag
ccagttccctgtcacccttctcccaccgctctgctgcccctgatcctcccagctgaaaac
cttcaccctgtcccacgaaaggatatcatcatgggacgtcctggcacagtgtggaccaat
gtagagccccggtcagttccagtcttcccctggcattcattggtccctttcctggcaccc
acccaatcagatgcttcttctcagccaggagagggccagaacccagtcaaccatccccaa
gcagccagtctgaagacagagtttcatggggttgcagcacagtcacaggagcctgcagag
gcacctcccattttagagagaggtcctccgtcccggcctcccccctcatctgatgagccg
cctccagagaaggagaaaggagatgcagagagggagaggcctgacagtgagacagagagt
gacgtggatgaccctttcctcccaggagttgtgccagagcagcccctctctacatcacca
gtaaagagacgcactcagtccctcagcgcgctgcccaaagatggagataagagcagccct
ggaaagagggagaaggaccacatccggcgaccaatgaatgcatttatgatttttagtaag
cgccatcgcgcattggtgcaccagcggcacccaaaccaggacaacaggacagtcagcaag
attcttggagagtggtggtatgctctgggacctaaggagaaacaaaagtaccatgatttg
gccttccaggtgaaagaggcccactttaaggcccacccagactggaagtggtgcaacaaa
gacaggaagaagtccagctctgagggccgtggggtaccagggggcaaagacatcagagag
aggagcatgtctgagtccacagaaccacattctgtggagctgaagggggtcggtccagga
ctggtgggcgtatctgaaagaagcacaggaaaaggtcatgtgggccagcttacccgtccc
cgagccttctctcaaagtgccatgcacagcctggagcggagtgatagaggcaatacacag
gccctggcagaactggcccagatgtgtggggacagtggcagtcagttttcgagtcatgcc
ccacccctgtcacagtcccagaggggggtcagcgaggacatgaccagtgacgaggagcgc
atggtcatctgtgaggaggagggagatgacgatgtcattgaggacccttatcctagcagt
tccatagacctcaagtgtaaggagcgggtgactgacagcgatagtgagaacggttctgga
gacgaaagtgatcggaagagagtttttgctccagtcatttgctcctctgcattatcatct
tcctcacaccatacccctcatggtaggagtgtctcactgtcctcttaccccagcagcaag
cgttatgatgaggggagatcaggagggggagggttttcagatcacaggaggaaggataga
ggagagggagaggggggaggagaagtgcaagccacatcgctctccctcacttctggccat
tcagtcatctccacttctccagctggagggcatccttcctcatcagtaggttcactgggg
gggaacccactcctgggcattggcgctgtaagggtggcctctacggtggtgaccaatgta
atgcgtcctgttatcagcacaccactccccatcgccagcaaacccagagatggaggcaca
tcatctagcccgcatccgccagagaggaagtccttgactccccatcagcagccacaattt
ctgattggctcaggatcaggaagcggggtccaagccccaggtggtgggtactactcttca
tcatcacctaatcctttaggtgcaggcgtgggccctggtggtgtagtgactaatttggtg
ttaggaggaactctgtctgctcatcctgctgtacagctcatcaccccttcccaccaccct
cagccctgccagcagcaggccttttcctcctccgctgtttcagtaccgcatagccaaacc
aacgggccactgcctctgtccctgcttcatccccagttccttcctgcctcttccctagca
tcccctgggggtaaggccatcacacaagttcagtacatcctgcccaccctacctgctaat
cccaagagtccacctcagcagctcagccagccaaccagtatcttcaacttgcccacagct
ccacccacacacatgtccctggccaatggaaagcagcaggggacaagttcactgacaggc
tatacgtccagctcagcagtgggggtggttagcccgggaactagagtgcaaacacagtct
ccagtgctccagggcaaaatgcttgttcccatggcaacagtacggacagcaccagcccct
gcccagcagtttcccattgtggctccacctcttccggtccagaacggtgctcagacagga
agcaagatcatccagatagctcccatgcctgtggtccagtcccagctgcctcaaggtgga
gcagtccaccctgccagccccttccctgtaacagttggcacagctgctgtggtggctcca
ggatcagccccctcccaggctgtactcctgccaccagctcctaccaggatcacctatgtc
cagtccactccaggggtcccatccactctgcctctggtctccacgacaaccggtgcttcc
gccacccagcaagccctgccggtgactggatctgcatatgttccatcgcccctggcaacg
cttgggttcacagccatcgcaccccctggacagacgctagttcagccactgattgcgggt
cagccaccgctcctagccacagctcagtctccacagccctccatctcagcccctgcctca
gcctccgggggccagatagtcaccgccatctaccctccttcacctagcgtcaccatggca
acaggtgtggtctccatgacagcagtaccccccagcgtggtctactccgtctctagccct
tccagcacttccccacacatcctgtccaaatacacagcaacccccactacaatcacgcat
ccacatccgcagccccatctggacagacaggcagacaggtacctgcctccggacagacct
gcagatcgacaaactgacagacaggctgagaggcagacagaactgccgacccattcggac
agacctctggagaggcaggcctccaccaatagcagctcagtggctcctcccagtggctca
gctgtgtccataaggccctgcagtcctccacttcacatccaaacgcctggcagtacacca
ggtacacccaaactaacccagcttccagtcaggacccctcagaaggtgaaggcaacagtg
gcgaacatccccgtaggcagctatgaaggaggaggccgaggaaaagagagagaaagggaa
aaggagagggagagagaaagggagagagaagctgcagccactagccgcttctcctttgat
cctgagcttgcagggcagacagggtctccatcaactcatcctgctgaggagctgccgtct
gctgacagaaccctggagggctccagtgttcctgactcctctgacacacaacacagagaa
agcacaagcaccaaagagactggatggagagattccctcccctcctcacctctcccccct
ccatcagccacggaacccagcctgccacccccacagactgacaaagatggtcctacaccc
aaaaaagtcaaagcccgcccaccaccacttaagaagacttttgactcggtggacaaggtg
ctgtcagaagtgtattttgaggagcgctttgccgagctgccagagtttcggcctgaagag
gttttgccttcacccaccctgcagagtctggccacttcaccccgcgccattctgggcagc
taccgtcgcaagaggaagaactctacagatttggactccgccactgacgagcaagtctct
cctaagagaaagagtcggcggcgctcaagttgcagctcagagcccaacacgcctaaaagt
gccgccaaatgcgagggggacatcttcaccttcgacagagcagccacagacggagaagac
atcctaacagatctggagtttgataaggtgccgtactcctcactgcggcgaacactggac
cagaggagagcactggtcatgcagctgttccaggagcagggcttctttccatcagctcag
gccactgcagccttccagacaagatactctgatatatttcccacaaaggtgtgtctgcag
ctgaagatcagggaggtccggcagaagatcatgcagacggctgccccctctgatgtctct
ggtttaggcatccctgactcaattggcaacctccctggaccttctagctcccagtcagga
gaaggatatatgagaggaggtggggacctgcaggatgaagacatggagcaagggacagaa
gggagcccagaggatcctcgtgattcaaaggactcttctagatga
DBGET
integrated database retrieval system
