Perca flavescens (yellow perch): 114557452
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Entry
114557452 CDS
T07494
Symbol
vars
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
114557452 (vars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pflv01007
]
114557452 (vars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pflv03016
]
114557452 (vars)
Enzymes [BR:
pflv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
114557452 (vars)
Amino acid related enzymes [BR:
pflv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
114557452 (vars)
Transfer RNA biogenesis [BR:
pflv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
114557452 (vars)
Prokaryotic type
114557452 (vars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
GST_C_3
DACNG
Jag_N
Motif
Other DBs
NCBI-GeneID:
114557452
NCBI-ProteinID:
XP_028436710
LinkDB
All DBs
Position
6:complement(16705350..16718768)
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AA seq
1284 aa
AA seq
DB search
MATLYVSPHPDDFRSLLTLIAAEFCPSSCLRTLTEDPPASLNARSRPTLLLGAGEGDSVL
SGASAVAWYLANQGNRAGIDTKQQSQVWQWLSFADNELTPVSCAVVFPLMGVIGVDKKLQ
QSSRADLIRVLKVLDQALEPRTFLVGESVTLADMAVATAVLLPFKYVLEPSDRKVLTNVT
RWFTTCTNQPQFLKVLGKITLCEKMVPVTPKTNAAANAKAANASLAVDSADATANGPPKT
EAQLKKEAKKREKLEKFQQKKDMEAKKKTQPLTEKKAKPEKKELGVITYSVPTAPGEKKD
VISPLPDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSISDHNPRGVFMMCIPPPNVTGSLH
LGHALTNAIQDSLTRWHRMLGETTLWNPGCDHAGIATQVVVEKKLMRERGLSRHDLGREN
FIKEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRS
KRLVNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIV
ATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVSDEFVDMSFGTGAVKIT
PAHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDRGHFKEI
KDNPMVVPVCSRSKDIVEPLLKPQWYVNCTDMGKQAADAVREGRLKILPDHHLKTWFNWM
DNIRDWCISRQLWWGHRIPAYFITVNDPSVKPGEDMDGHYWMSGRSEEEAREKAAKRFNV
SADKITLRQDDDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARM
VMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHALLMDSN
LDPGEVEKAKQGQASDYPNGIPECGTDALRFALCAYTGQGRDINLDVNRILGYRHFCNKL
WNAVKFAMKTLGDNFVPSEKAQLCGEESVSDRWILSRLSAAVGLCDAGFKAYDFPTVTTA
IYNFWLYELCDVYLESVKPVFSKAEEDSASQRQALLCRQTLYTCLDVGLRLLSPIMPFVS
EELYQRLPRRRPQSDPPSISVTPYPNTQEFCWHSEEVDRDMEFVMTVIKTIRSLRADYNL
TKTRADCYLQCIDSATVSLVQKYSLQIQTLSYSQAVIPVTGNQPVPGGCAVVIASDRCTV
NLMLKGLIDVEKEVTKLMTKKGDLEKQMEKMREKMAKSDYKEKVPVKVQEQDADKLRQSQ
TELEKVKEAMDNFRKMMGLSLSIM
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtgtcccctcaccctgatgacttcaggagccttctgactctcata
gctgcagagttttgtccgtcctcctgcctgcggaccctcacagaggaccctcctgcatcc
ctgaatgcccgctccagaccgaccctgctgctgggcgctggggaaggtgactccgtcctg
agtggggccagtgctgtggcctggtacctggctaatcaggggaacagggctggtatagat
acaaagcagcagagccaggtgtggcagtggctcagctttgcagacaatgaactcactccg
gtgtcctgtgctgtcgtcttcccactgatgggggtgattggagtggataagaagctccag
cagagttcccgtgcggatttgatacgcgttctgaaggttctcgatcaggcactggaacca
agaaccttcttggtgggggagagtgtcaccctggctgatatggctgtagctactgctgtt
cttctccctttcaaatatgtgttggagccatcagacaggaaagtcttgaccaatgtaacg
aggtggttcacgacttgcacaaatcagcctcagttcctgaaggtgttggggaagatcact
ctttgtgaaaagatggtgccagttacaccgaaaacaaatgctgctgcaaatgctaaagct
gccaatgccagtcttgccgttgattctgccgatgccacagctaatggtccaccaaagaca
gaagcccagctgaagaaggaagctaagaagagagaaaagctggaaaagtttcagcagaag
aaggacatggaggcgaagaaaaagactcagccactgacagagaaaaaggccaaaccggaa
aagaaggagttgggagttatcacatacagtgttcccactgctcctggggagaaaaaggat
gtcattagcccgcttcctgactcctacagtcctcagtatgtggaggctgcctggtattca
tggtgggagaaacagggattcttcaagcctgaatatgggaggaagagtattagtgaccac
aaccctcgtggcgtcttcatgatgtgcatccctccacctaatgtgactggatcacttcac
ctgggtcacgccctcaccaacgccattcaggattctctgaccagatggcacaggatgcta
ggggagaccaccttgtggaacccgggctgtgatcacgctggcatcgccacccaggtggtg
gtggaaaaaaagctgatgagagagaggggtctgagccgccatgatctgggcagggaaaac
ttcatcaaggaagtttggaaatggaagaatgagaagggagaccgtatctaccaccagctg
aagaagctgggctcctctctggactgggacagagcctgctttactatggaccctaaactt
tcctatgcagtccaagaggcttttatccgcatgcatgatgagggagtgatctacaggagc
aagcggctggtcaactggtcctgcacactaaactctgccatctctgacatagaggtggat
aagaaagagctcagcggcaggactctgttgcctgtgcctggttacaaagagaaagtggag
tttggagtgttggtgtctttcgcctacaaggtggacggatcagatgaggaagtgatcgtg
gcaacaactcgtattgagactatgttgggagactctgctgtagctgtccaccctgctgac
cccagatatcagcatctgaagggaaaaatggtgctgcaccccttctgtgaccgcaagatg
ccaattgtctcagatgaatttgtggatatgagctttggaacaggtgctgtcaaaattacc
ccagcccatgaccataatgactacgaggttggagagagacacaatctggccttcatcaac
atcttggacgagaatggcctcctcattaacgtgcctcctcccttcctgggcatgaagcgt
tttgaggccaggaaggccgtgctgcaggctctgaaggacagaggccactttaaagagatc
aaagacaaccctatggtcgtcccagtctgcagtcgttccaaagacattgtggagccgctg
ctgaagccgcagtggtatgtgaactgcacagatatgggcaagcaggctgcagacgctgtc
agagagggacggctcaaaatccttcctgatcaccacctcaagacgtggttcaactggatg
gacaacatccgggactggtgtatctctcggcagctgtggtggggtcaccgtattcctgct
tacttcatcactgtcaacgatccctccgttaaaccaggagaggacatggacggtcattac
tggatgagtgggagatcggaggaggaggccagagagaaggctgcaaaacgcttcaatgtg
tctgctgacaaaattaccctcagacaagatgacgatgttctggacacttggttctcgtct
ggcattttccccttctccatcttcggatggcctaatgagacccaggacctgaatgtgttc
taccctggcaccttgctggagacgggccatgacatcctgttcttctgggttgctcgaatg
gttatgatgggcctcaaactgacaggcaagctgcccttcaaagaggtttatctgcatgca
gtggtgagggacgcccacggaaggaagatgagcaaatctttgggcaacgtcattgaccct
ctggatgtcattacagggatctccctcgagggtcttcatgcccttttgatggacagcaac
ttggatccaggggaggtggagaaggcaaagcagggccaggcatcagactacccaaatggc
atcccagagtgcggcacagatgctctccggttcgccctgtgtgcctacactggccaaggt
agggatatcaacctggatgtcaaccggatccttggttaccgtcacttctgcaacaaactg
tggaacgctgtgaagtttgccatgaagacgctgggagacaactttgtaccatcagagaaa
gcccagttgtgtggggaggagagcgtatcagacaggtggattctgtctcgactgagtgct
gctgttggtctctgtgatgctggcttcaaggcctatgacttcccaaccgtcacgaccgcc
atctacaacttctggctgtacgagctctgtgacgtctacctggaaagtgtgaaaccagtg
ttcagtaaagcagaggaagacagcgccagccagagacaggccctgctgtgcagacaaacc
ctttacacctgtttagatgtcggtctgcgccttctttctcctattatgcccttcgtcagt
gaggagctctaccagaggttaccacgacgacgacctcagagtgatccccccagcattagc
gtcacaccctaccctaatacacaggagttctgctggcacagtgaggaggtcgaccgtgac
atggagttcgtaatgactgtgatcaagacgatccggtcactgagggccgactacaacctg
accaagaccagagctgactgctacctccagtgcatagactctgcgaccgtgtccctggtg
cagaagtacagtctgcagattcagaccttgtcttattctcaggccgtcattcctgtgacc
ggcaaccagcctgtcccaggaggctgtgctgtggtcatcgcctctgacagatgtactgtc
aaccttatgctcaagggtctcatcgatgtggagaaggaagtgactaagctgatgacaaag
aaaggtgacttggaaaaacagatggagaagatgagagagaaaatggcaaagagcgactac
aaggagaaggtgccagtgaaggtgcaagagcaggatgctgataagctacggcagagtcaa
actgaacttgaaaaagtgaaagaagccatggacaacttcaggaaaatgatgggactttcc
cttagcattatgtaa
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integrated database retrieval system
