Perca flavescens (yellow perch): 114557523
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Entry
114557523 CDS
T07494
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114557523 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114557523 (emg1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
114557523 (emg1)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
90S particles
Other 90S particles
114557523 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
114557523
NCBI-ProteinID:
XP_028436844
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All DBs
Position
6:17327025..17330643
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AA seq
256 aa
AA seq
DB search
MRTSAVTHTFRDSPAEGIMAAPNEKKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILE
GASLETVKVGKTFELLNCDQHKNMIVKSGRNPGHIRPDITHQCLLMLMDSPLNRAGLLQV
YIHTEKNALIEINPQTRIPRTFTRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLP
PGCPRISTSFSATGEAVCPRSLVPEGPAAVVVGAFAHGAVNVDYTEKTVSISNYPLSAAL
TCAKMCSAFEEVWGVV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttccgccgtgacgcacacattccgcgacagtccagctgaaggaatcatggcg
gctcctaatgagaagaagcgtggtcttgaacatttggacgaatatgaaccaaaaccagcc
aaacatctccgcagcctgcacgaccgtatggcagagaggagactggttgttattctggag
ggagcatcgttagaaacagtgaaggtcggaaaaacctttgagctgttaaactgtgaccaa
cacaaaaatatgatcgtcaaaagtggaaggaatccgggacatataagaccagacatcaca
catcaatgtctgctcatgttgatggacagtccactgaacagggcaggccttttgcaggtt
tacatccacacagagaaaaatgccttaatagagatcaacccacagacccgcatcccaaga
accttcactcgcttctgtggccttatggttcagctgctgcacaagctgagtgtcagggct
gctgatggtcctcagaagcttctgaggatgattaaaaacccagtgtctgaccacctgcct
ccaggctgcccccgcatatccacctccttctctgctactggagaggctgtctgtcctcgg
tctttggtgccagagggaccagctgcagtggtggttggagcatttgcacatggagcggtg
aatgtggactacacagagaagacggtgtccatcagtaactaccccctctctgcggcactg
acctgtgccaagatgtgctctgctttcgaggaagtgtggggtgtcgtgtga
DBGET
integrated database retrieval system
