KEGG   Perca flavescens (yellow perch): 114557550
Entry
114557550         CDS       T07494                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114557550 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114557550 (xrcc1)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     114557550 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 114557550
NCBI-ProteinID: XP_028436874
LinkDB
Position
6:complement(12791773..12819420)
AA seq 625 aa
MPEIQLKHVVSCTTEDPTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNLNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGVAFVKFHSPPDKNDPPPTTSPKLTKLGQFKVKEEPLSP
AASLQPGSLFFSRDNATKSSTSLKVSPQNERLSYAAAALQAGGSSHSSGQASSSSSASPQ
PPAKRKFEFSKARQSSPGPPPSKKISPAGSPEGKAVTPKHKASPASTPSPSTAKAAPGQK
SADRKRESQSKPEPKPKQPKPSVQQVPFKRMMEGVVFVLSGFQNPFRGELREKALDMGAK
YRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRREWIMDCHKRKQMISYKRYLMDGAES
SSESEMEGDDQSEEEINKKTPPKQERQVTPKKMPEKKTEDDEYAGSTDVDEPGDGDDESA
VDTEDELQRVENESRQKKAAVGGKVVKQEDPYGGSTDENTDAEAEEDHPIPELPDFLKGK
HFFLYGKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHNSFEDALMENGNLNF
VKPAWIYAINERQKILPYQPYSVVP
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgccagaaatccaactcaaacacgtcgtgtcttgcaccaccgaggaccctactcacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaagacccggggag
aaacagacatcagtcattctgcagttcgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaaggatcagctttcatcgaggtgctggtggggaattcttcagctgtcagagac
caggactatgaggttcttttggtcacgtcttccttcatgtccccaacggagagccgtaac
ggcaccaacttgaaccgggtgcgtttctttgggcccaaccagctgcagaagagcacagca
caggagaagtgggaccgagtgaaaattgtgtgtagccagccatacagcaagaacatagcg
tacggagtggcctttgttaagtttcattcgccgcctgacaaaaatgatcctcctccaaca
acatccccgaaactgacaaagctgggacagttcaaggtgaaggaggagcctctttcacct
gctgccagccttcagcctggcagtcttttcttcagtcgggacaatgcaacaaagtccagt
acttcactcaaagtgtctcctcagaatgagaggttgagttacgctgcagctgccctgcag
gctggtggcagctcccactcatcaggccaagcttcctcctccagctctgcctcaccacag
ccaccagcaaaaaggaaatttgagttcagcaaagcgcggcaatcttcccccggccctcca
ccctcgaagaaaataagccccgctggctcacctgagggcaaagctgtgacccccaaacac
aaggcgagcccagccagcacgccaagccccagcactgcgaaagctgccccggggcagaag
tctgctgacaggaagcgggagagccaatccaaacccgaacccaaacccaaacaaccgaaa
cctagcgtgcagcaggtcccattcaaacggatgatggagggggtcgtgtttgtcctcagt
ggcttccaaaaccccttcagaggggagctgagggaaaaggctctggacatgggagccaaa
taccggcccgactggacacccgactccacacacctcatctgtgccttcgctaacaccccc
aagtacagccaggtgaaatcagcagggggcatcatcgtacggagagaatggataatggac
tgccataagaggaaacagatgatctcctataaacggtatttgatggatggagcagagtcg
agctcggagagcgaaatggaaggggacgaccagagtgaagaggaaatcaacaaaaagact
ccaccgaagcaggagagacaagtgaccccgaaaaagatgcccgagaagaagactgaagat
gatgagtatgccggctccactgatgtggatgaaccaggagacggtgatgatgagtctgcg
gtggacacggaggacgagctgcagagggtggagaacgagagcagacagaagaaagcagca
gtgggagggaaggtggtgaaacaggaggatccatatgggggatcgacagatgaaaacaca
gacgccgaggctgaagaggatcaccccatccctgaactaccagacttcctgaaaggaaag
cattttttcctctacggtaaattccctaacaacgagaggcgccttctgctgagatacatc
gttgcctttaatggactgattgaggactacatgaccgagaaggtgcagtttgtggtgact
agtgaaggatggcacaactcctttgaagacgcgctgatggagaacggcaatctgaacttt
gtcaaacccgcatggatttatgcaatcaatgaacgacaaaagatactgccctaccaaccc
tactcggtcgtcccctga

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