Perca flavescens (yellow perch): 114557633
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Entry
114557633 CDS
T07494
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114557633 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114557633 (cnot3)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114557633 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114557633 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
114557633
NCBI-ProteinID:
XP_028437004
LinkDB
All DBs
Position
6:complement(18156855..18168465)
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AA seq
909 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSIPVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGSSPAVPSSNSLIGSFSSAVQQHQHQP
AQQQQQPQPPNQPQQQQPPHTKPSVPSNNTPSPPSNPLLPASPAPSLPTPSTPSSLALNS
QSQLTSVPTPASGLGLGLGLGLSKIGMTGTSSANQMSGLGLGGHPSSLNTMAGLISGSTP
APYAQAAASGGLGLSSTTQSSISENSTSIPTSGSSGVTTNGAGIGLGLLGSSPAHNSLSG
SILGLVPGQNVAPGASQVSPSSVSTTPGVVGMMGSSGGNISVVGAVGVNAAPARPPSGLK
QNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPPSSPS
PSFSDSTPGGGSLLNGPHSYTQASEALKAPEPLSSLKAMAERAALGSGLDGEIPNLHLTD
RGRNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTH
MPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQ
YLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEY
RYLEDRDLQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaactacaaggtgagatcgatagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagacatctggcaaaagctccataatgcagccaatgcaaaccag
aaggaaaaatatgaggctgatctcaagaaagagattaaaaaactacagcgattgagagat
caaataaaaacatgggtggcctcaaacgaaatcaaagacaaaaggcagctagtcgagaat
cgcaaacttatagagacgcaaatggagcggttcaaggtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttagggctcgctcagaaagtggatccagctcagagggaa
aaagaggaaacgggacagtggctaacaaatacgatagacactctaaatatgcaggtggat
cagtttgaaagtgaggtggaatctctttcggttcagacgagaaagaagaagggtgataag
gataagcaagatcgtattgatgagctcaagcggttgattgagaggcatcgattccacatt
cgcatgttggagaccattttacgaatgctagataatgactcaataccagtggattcaatc
cagaagatcaaggatgatgttgaatactatattgattcctcccaagacccagactttgag
gagaatgagttcttgtatgacgacttagacctggaagacatccctgcagcattagttgca
acttctccatcaggtcagggcaatgtggaggatgagatgtatctccactccagcagcact
cccacttccacaacctcttcttcacccattcctccatccccggccacttgcactgctgag
aactcagaggacgataagaaaaggggacgatcgacagacagtgaagttagtcagtcacct
gtgaagaacggcaccccatccttgctatcttccttctcctcctccaccacctctgggtcc
tcctcgtcctcctcacttgtgtccatggcgagtgttgtcggaagcagtcccgcggttccc
tcaagcaacagtcttatagggagcttcagcagtgcggtgcagcaacatcagcatcaacct
gcacaacagcagcaacaacctcagccaccaaaccaaccacagcagcagcagccacctcat
acaaaaccctctgtcccctcaaacaacacccccagcccgccaagcaaccctcttctccca
gcctcacctgccccctctctccccacgcccagcacacccagttcattagctctcaactct
cagtctcagctcacatctgtgcccaccccggcatccggtttgggactcgggcttgggctg
ggattgagcaaaattggcatgacggggaccagcagtgccaaccaaatgtctggtctgggc
ctgggtggccacccctcttctttaaacacaatggcagggctcatttcgggctccacacct
gccccttacgctcaggcagcagcttcaggaggcttgggtttgagcagcaccacccagtcc
agcatttcagagaacagcacttccatccccacctctggctccagtggagtcaccaccaac
ggagcggggatagggctcggtttgctaggttccagcccagcccacaactctttgagtggg
agtattttgggtctggttcctgggcaaaatgtagcccccggtgcctctcaggtgtcacca
agttctgtcagcactacccccggagtagttggcatgatgggaagcagtggagggaatatc
agcgttgttggagcagtaggggttaatgctgctcctgctagaccacccagtggactgaag
cagaatggaagcacaagttacagtgctgtagtggcagagagctccacagaatcagctcta
agcacaccgagccagtcacaaagcagccaaccctcatctctcagttcttcaaccagtcag
ccgatggacaatggtcccagtttaatcagctccatcaccctgcctcccagctctccgtcc
ccatcgttctcagacagcacacccggaggagggagtcttctcaacgggccccactcctac
acacaggcctctgaggccctcaaggcccctgagcctctcagttcgctgaaggcgatggct
gaaagagcagcgctgggatcaggcctggacggagagattcccaacctgcacctaacagac
agaggtcggaacgatatcttctctggttcatctgcagcgcccggcactccagccgccccc
cagccgtccgtgtcggaagtcagcatccccccctcgctcggggtctgtccacttggcccc
acccctctccccaaagaccagctctaccagcaggccatgcaggaatccgcatggacacac
atgccacacccctccgactctgagaggattaggcaatacctgatgaggaatccatgtccc
acattgccattccatcatcagataccgccgcaccactcggactccatagagttttaccag
agactgtccacagaaactctctttttcatcttctactacctagagggcaccaaggctcag
tatctgtctgccaaggctctgaagaaacaatcttggaggtttcacaccaagtacatgatg
tggttccagagacacgaggagcccaagactatcactgatgagtttgaacagggcacttac
atttactttgactatgagaaatggggccagaggaagaaggaggggttcacctttgagtac
aggtaccttgaagaccgagatctgcagtga
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