Perca flavescens (yellow perch): 114557687
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Entry
114557687 CDS
T07494
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
pflv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114557687 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
114557687 (rbm8a)
03015 mRNA surveillance pathway
114557687 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114557687 (rbm8a)
03041 Spliceosome [BR:
pflv03041
]
114557687 (rbm8a)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114557687 (rbm8a)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114557687 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
114557687
NCBI-ProteinID:
XP_028437108
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All DBs
Position
6:11550600..11556183
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNAQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggatcttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgagagcatccacaagctgaaggagaaagctaagaagaggaaagggcgaggcttt
ggttcagaggaaggagccaggtccagaatcaaagaggactatgatactgtggagcaagat
ggggacgagccaggccctcagagatctgtggagggctggatcctgtttgtgacaggtgta
catgaagaggccacggaggaagacatccatgacaagttttcagagtttggagaaatcaag
aacctgcatctcaaccttgaccgcagaacaggctacctcaagggatatgcactggtggag
tatgagacatacaaagaggcccaggcagccatggaagggctcaacgctcaggacatgatg
ggccagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggcggacggagacgcagcagaagtccagacaggaggcggcgttga
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