Perca flavescens (yellow perch): 114558066
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Entry
114558066 CDS
T07494
Symbol
taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114558066 (taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114558066 (taf4)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114558066 (taf4)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114558066 (taf4)
Coactivators
SAGA/TFTC/STAGA complex
114558066 (taf4)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114558066 (taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
AcMNPV_Orf101
Motif
Other DBs
NCBI-GeneID:
114558066
NCBI-ProteinID:
XP_028437587
LinkDB
All DBs
Position
7:complement(13646013..13660899)
Genome browser
AA seq
972 aa
AA seq
DB search
MRLTSERSLAKMAAGSDLLDDVFFNTDVDEKVVSDLVGSLESELTGAERVNATNRVQSAA
NHAGNSAVGNVSNSNVQGLGGSKMGLSQQELAKAGTGVQGGVINSTGSHGSSMDGAAGTT
SSMTAAQSQSKPGTASGVVTVVSDAASGVGKPGTTGVQTLNGSSVVMNCHITGGTSGNNS
QPAVTLVNNGPVSVSKGSATVLSATPSTIVRNSSTSAQNAVVSSQSSVKSVPTVTLVRPP
MQTNTSQSGGSQTTVLTSPAVSVTSSAGSLVNKFDSTKAIMQTGAHVVASAVATGTIATM
RSPTVLQNLRTSVPSTIAATPPGGIRAIAPQVLAPRLTQPQQNAPNIQNIQLPPGMVLVR
SESGQLLMIHQQTLAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQVPGASLLACPVTPT
AIIKQGSTVQTTVTTSTTLQRPPVQQNTIMLGGTAPTPGQPLGTPTTAQPGSVATAVTQR
TPVTPTAVTAETLENVKKCRNFLSTLIKLASSGKQSSETTANVKELVKNLLEAKIEPEDF
TSRLYRELNSSPQPYLVPFLKRSLPALRQMTPDPEAFIQQSLLPLPSTQSAAAVSTALTA
VMLRPPLSTATSTAATKTTVISLPQAPHSKPGLIVPQQQGTMVRPQGTLAQSPMVTLRGQ
SHSRIIVGQPQVVKQLQTAVKQTLAPGAKGVQLVSQAPLTAAQKNKLREAGGGTFREDDD
INDVASMAGVNLSEESARILATNSELVGMVTRSCKDETFLSTSLLTQRALEIGKKFGVGE
LGTDVINYISHATQQRLQNLLEKVSQVAQQKNTTFKEDERYEPVSNVRNQLKFFEHLDQV
ERQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIG
PRKKRKMDSPVRGASAEGSGSGPSQPGGSGGAGSRQFMRQRITRVNLRDLLFCLENERGT
SHSHLLYKGFLK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgagcgtagcttggcaaagatggcggcgggctccgatttgctggat
gatgttttcttcaacacagatgtggacgaaaaagtagttagtgatctagtcggatcgctg
gagtctgaactaacgggagcagagcgcgttaacgcaacgaacagggtccagtccgcagca
aatcacgctggcaactcagctgtaggtaacgttagtaattccaatgttcagggtcttgga
ggcagcaaaatgggactttcacaacaagagcttgctaaagcagggacaggagtgcaagga
ggtgtcattaacagtacgggttcccacggttcaagcatggatggagcagccgggaccaca
tcgagcatgacagccgctcagagtcagtccaagcccgggacagctagcggagtcgttacg
gtcgtatcagatgcagcatctggtgttgggaaacctggaacgactggtgttcaaactttg
aatggaagtagcgttgtgatgaactgtcatatcaccggaggcacgagcggcaacaactcc
cagcccgccgtcacgcttgtcaacaacggacctgtttcagtgagcaaaggaagcgcaaca
gttttgtctgcaacaccaagtactattgttcgaaattcttcgacgagtgcgcagaatgct
gtggtttcgtctcagtcctctgtgaaaagtgtacccactgtcacgcttgtgaggccacct
atgcaaactaacacctcacaaagcggaggcagccaaacaacggttttaacatcacccgct
gttagtgttaccagctcggccggctcgctcgtcaacaaattcgactctacaaaagctata
atgcagactggtgctcacgtcgtggcttcagctgttgcgacagggacaatagcgaccatg
aggagcccgactgttttgcaaaacttgaggacttcagtaccgtcaacaatcgctgctact
cctcctggaggaatacgagctattgctccacaggtgttggcccctcgactcactcagcct
caacaaaacgccccaaatatccaaaacatccagctccctccaggcatggtcttggttcgc
agtgagagtgggcagctgctgatgattcaccagcagaccttggctcagatgcaggctcag
tcgcagtcccaaagcgccatgacaccacgacctgcagcccccaccagcactccacctgtc
cagatcacttctctacaggttccaggcgcgtcactactggcttgtccggttacccccacc
gccattattaaacaaggttccacagtccagaccactgtgacaacctctaccacactgcag
aggccgcctgtacagcagaacaccatcatgctgggaggaactgcccccaccccgggacag
ccgctcggaacgcccaccacagcgcagcctggttctgtagccacagcagttacacagagg
acccctgtcactccaacagctgtcacagctgaaacactagaaaatgtaaaaaagtgtaga
aactttctgtccacgttgatcaagctggcatccagtgggaaacagtcctcagagactacg
gccaacgtcaaggagctggtcaagaacttgctggaagcgaagatagagcctgaagatttc
accagtaggttataccgggagctcaactcctcaccacagccctaccttgtgcctttcctg
aagagaagtctcccagcactgcgtcagatgaccccagacccagaggccttcatccagcag
agcctgctgcccctgcccagcactcagtctgctgcagcagtctccacggccctcaccgct
gtgatgctgcgacctcctctctccacggccaccagcactgccgcgaccaaaaccacagtt
atcagccttcctcaggcacctcacagtaaacctggactgatagtgccccagcaacagggg
acgatggtcaggccacaggggacgctggctcagtctcccatggtaacactcagaggacaa
tctcatagccgtatcattgtgggccagccgcaggtggtcaaacagctacagacagcagtg
aagcagacattggctccgggggccaaaggagtgcaattagtcagtcaggccccactcaca
gctgctcagaagaacaagctgagggaagcaggagggggaaccttcagagaggatgatgat
atcaatgatgtggcctccatggcaggggtcaacttgtcagaggagagtgcccgtatctta
gcaaccaactctgagcttgttggcatggtgactcgttcttgtaaggatgagaccttcctc
tccacctctttactcacacagagagctctggagattggtaagaagttcggtgttggcgag
ttgggcacagatgtgatcaactacatttcccacgctacacagcagcgcctacaaaacctg
ctggaaaaggtgtcacaagtggcacagcagaaaaacacaactttcaaggaggatgagcgg
tatgagccagtaagcaatgtgcgaaaccagctgaaattctttgagcatctggatcaggtg
gagaggcaaaggaaggaagagcaggagagagagattctcctgaaggctgccaagtctcgg
tcacggcaagaggaccctgaacagctcagactaaaacagaaggccaaagagatgcagcag
caggagttggctcagatcagacagagagaagccaacctaacggcgctggcagcaatcggt
ccgaggaaaaaacggaaaatggactctcctgttaggggcgccagtgcagagggctcaggg
tcaggcccctctcagcctggaggctccggtggagcaggctccagacagtttatgcgacag
cgcatcaccagagtcaacctcagggacctgctcttctgcctggagaatgaaagagggacc
agtcactcacacctgctgtataaaggcttcctcaaatag
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integrated database retrieval system
