Perca flavescens (yellow perch): 114558283
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Entry
114558283 CDS
T07494
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114558283
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pflv03310
]
114558283
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114558283
Nuclear receptors [BR:
pflv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114558283
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
114558283
NCBI-ProteinID:
XP_028437952
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Position
1:complement(42556566..42595909)
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AA seq
480 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCL
IDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQGPLLL
SHPSLSSPNPSETEPLSPHFGLTELSEELGGYVKHNSPEGGSVSSKADSGGGGEGRGFYL
DIQPSPDQSGLDINGIKPEPLCDNGSSNGFFPYCSFSEGDTSPTVSMAELDHLVQTISKS
HLETCQYLREELQQMSWQNFPQDEVESYQSKPREVMWQLCAVKITEAIQYVVEFAKRIDG
FMDLCQNDQIVLLKAGSLEVVLVRMCRLFDSQNNSVYFDGKFAGPDVFRALGCDDLITSV
FDFASSMCSLRLSEDELAVFSAFLLLSADRSWLQEKLQVEKLQQKTQLALQHVLQKNQRE
DGALNKLRCKVSALRSLCTRHTETLLAFRAVYPDVVRTHFPPLYKELFGADLELTLHGAD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgccatgaaagctcagattgaaatcattccctgtaagatctgt
ggagataagtcatcagggatacactacggggtgatcacctgcgagggctgtaagggtttc
ttcaggcggagtcagcagagtaacgccgcctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccgcaaccgctgccaacactgccgtctgcagaaatgtctggctttg
ggcatgtcccgagacgctgtgaagtttggtcgcatgtccaagaagcagcgggacagtttg
tacgctgaagttcagaaacatcgcctccagcagcagcagcagcagggacccctccttctg
tcccaccccagcctcagcagcccgaaccctagcgagacggagccgctctcccctcacttc
ggcctgacggagctatcagaagagctgggaggttacgtgaaacacaactcacctgaagga
ggatctgtatcgtccaaggcggactctggagggggaggagaaggtcgggggttctacctg
gatatccagccatccccagatcagtccggactcgatattaatggcatcaaaccggagccg
ttgtgtgacaatggatccagtaacggcttcttcccatactgctccttcagtgaaggagac
acctcacccacagtgtccatggctgaactcgatcatctggttcagaccatctcaaagtct
cacctggagacgtgtcagtacctgagggaggagctgcagcagatgagctggcagaacttc
ccacaggacgaggtggagagctaccagagcaagccgcgggaggtgatgtggcagctgtgt
gccgtaaagatcaccgaggccatacagtacgtggtggagttcgccaaacgtatcgacggc
ttcatggatctctgtcaaaatgaccagattgttctgctgaaagccggctctctggaggtc
gtcttggtccgaatgtgtcggctgtttgactcgcagaacaacagcgtctacttcgacggg
aagtttgcaggtccggacgtcttcagggcgctcggttgtgacgacttgatcacatcagtg
tttgactttgccagcagcatgtgttctctgcgtctgtcggaggacgagctcgccgtgttc
tcagcgttcctcctgctctctgcagaccggtcatggctgcaggagaagctgcaggtggag
aagctgcagcagaagactcagctggctctgcagcacgtcctgcagaagaaccagagagag
gacggagcgctgaacaagctcagatgtaaggtgtcagcgttgcgctccctgtgcacccgt
cacacggagacgctgttggcgttccgcgccgtctaccccgacgtggtgcggacacacttc
cccccgctctataaggagctgttcggggccgacctcgagctgacgctgcacggcgccgac
taa
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