Perca flavescens (yellow perch): 114558385
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Entry
114558385 CDS
T07494
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114558385 (apex2)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
114558385 (apex2)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
114558385 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
114558385
NCBI-ProteinID:
XP_028438159
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Position
7:complement(10834609..10838272)
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AA seq
582 aa
AA seq
DB search
MKIVTWNINGIRTFRGGIKNALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDQTEFCSEELQLLDNEGRAV
ITQHRIMCQNKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDIDDFGENPGRKWLNGFLHSGRREAEEMNEQEPGEESEVTSTDP
IHSGTFVDTFRYFHPTRTSAFTCWSTLTGARQTNYGTRIDYIFADCQLAKEQFVAADIRP
EVEGSDHCPVWGQLSCSLLPNSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSIQPEQRD
ALPGSQEEEERRENLNPSRAGIVFGKKRLLTSDCVVPKGKKTKTVKTSSKPQGSLLSFFK
PKLTNVVPSPEASVRQCEKTLRVDEVTSSQNSQKAATTSEIRSSVPGDTEPVYGSQPQRS
SGTTTEESDKPTKTHTTHLTPQPSVGCSDAKKGASLGFWKSVLHGPPPPPPCKVHGEPSV
LRTVKKEGPNMGKQFFVCARPQGHASNPEARCNFFAWVDKGK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaatggcataagaactttcagaggcggaattaaaaat
gctcttgattcactggatgcagatattatctgtgttcaagagacaaaagtgacaagagac
ttgcttgatgaaagaactgccattgttgacggctacaactcctatttcagcttcagtcga
ggacgcagcggctattcaggggttgccacttactgtaaagacagtgccactccatttgct
gctgaggagggtctcacgggtctgctgaccaaccatgaaggggctgttggctgctatggt
gaccagactgagttctgtagcgaggagctgcagcttttggacaatgaaggacgagcggtt
atcacacagcacagaatcatgtgtcagaacaaagagcaaactgttactgtaatcaatgta
tactgtccacgggctgaccctgaaaagccggagcgaaagcagttcaaactgcagttctac
aagttgcttcagagtcgggctgaagctatactgaaagatgggagccatgtgattgtttta
ggagatgtaaatacatctcaccggcaaatagaccactgtgaccccagtgatattgatgat
tttggtgaaaaccccgggaggaaatggctgaatggctttttgcacagtggcagacgagag
gcagaggaaatgaatgagcaggaacctggggaagaatctgaggtaacctcaacggatccc
atccacagtggaacatttgtggataccttccgctatttccacccaactcgcaccagcgcc
ttcacatgctggtccactctcactggagcgcggcagaccaactatggcacacgcattgac
tacatattcgctgattgccagctagccaaggagcagtttgtggcagcagacatcaggcca
gaggtggaggggtcggaccactgccctgtgtgggggcagctgagctgctctctcctgccc
aactccaagcctccccccctctgtacacgctacctgccagagttcgctggcaagcagcag
aaactctcccgcttccttgttaaggtggaccaaaaatcaattcagcctgagcagagggat
gcgctacctggatctcaagaagaggaggaaaggagggagaatttaaacccttccagagct
gggatcgtctttggtaaaaaacggttattaacatcggactgtgttgtgccaaaggggaaa
aagactaagacagtcaagacctcttcaaagccacagggcagcctcctttcctttttcaaa
cccaaactcacaaatgtcgttccctcccctgaagcctcggtcaggcagtgtgaaaaaacc
ctccgcgtggatgaagttacctcatcacagaactctcaaaaagcggccacaactagcgag
atcagaagcagcgtacctggagatactgagcctgtctacggttcccaaccacagcgcagc
agtggcaccaccacagaggaaagtgacaaaccgacgaagacacacacaacacatttaacc
ccacagccctctgtgggatgctcagatgccaagaaaggggcatcgttagggttttggaag
tcggtgcttcatggacctcccccgccccccccctgtaaggtccacggggaaccatctgtg
cttcgtactgtgaaaaaggagggtccaaacatgggcaaacagttctttgtgtgtgcccgt
cctcagggacatgcctccaaccccgaagctcggtgtaatttctttgcatgggtcgacaag
ggaaagtga
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