Perca flavescens (yellow perch): 114558440
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Entry
114558440 CDS
T07494
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114558440 (dhx35)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114558440 (dhx35)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
Complex C specific factors
114558440 (dhx35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
ABC_tran
AAA_22
Cas3-like_C_2
AAA_19
nSTAND3
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
114558440
NCBI-ProteinID:
XP_028438254
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Position
7:complement(16623919..16632112)
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AA seq
699 aa
AA seq
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MAAPLSTMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQLPQYLLEAGWATEGKVIGVTQPRRVAAISVANRVAE
ERGALVGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
MYTDIAIGLLKKIQKKRQDLRLIVASATLDAKKFHDFFNQNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERTPNSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPSNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAGTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVYGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTA
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccggggtcggaggctccgggaatc
tcagaggagcgggagctcaacacagagacaaccggctcccccatcatcttcaacccgcac
acagccctctccatagagaaacaacgacagaaactccctgttttcaagcacagaaacaac
atcttgtacttggtggagagcttccagactgtcatcatagttggtgagacaggatgtggg
aaaacaacgcagttacctcagtacctgctggaagctggctgggcgacggaggggaaggtg
attggagtgacacagcctcggcgtgtggctgccatctctgtagctaaccgtgtagcggag
gagcggggggccctggtgggacatgaggtgggctacaccatccgatttgatgactgctct
gatccccacgccacaaggatcaagttccttacagatggcatgctggtgcgggagatgatg
gctgatcctcttttgaaaaagtacagtgtgttgatgctggacgaagcacatgagagaacc
atgtatacagacatagccattggcctactaaagaagattcagaaaaagcggcaagacctg
aggctgattgtggcctctgccactctggatgccaagaaattccacgacttcttcaaccag
aacgagtccggggatcctaacaaggacacgtgtggaattctgacagtggagggacgtacc
tttccagtggatgtcttctacactgtcagtcctgtcccagactatgtgaaggccacagtg
gagacagtgctcaagatccatgagacggaggatgacggagacgtcctggcttttcttact
gggcaggaagaagtggagaaagtggtgtcccttctgcaggaccaggccaggtctctgtct
cgatacggcatgaagaaacacctgagaattttgcccatgtactctggtctaccttatgct
gagcagatgaaggtctttgagaggacacccaactctgttcgcaaggttgtggtggccacg
aacatagctgagacctccatcaccataaatggagttgtatttgtcattgactgtgcattt
gtgaagctgcgggcctacaaccctcgcactgccattgagtcactggtggttactcccatc
tccaaggcttcagccagccagagggctgggagagccggacgaaaccgacctgggaaatgc
tttagactatacacagaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcattaggcattgacaatgtg
ctgcggttcagcttcctttctcctcctccagctcagaccatggttcaggctctagagctg
ctctacgctctgggaggtctggaccattacggacgtttgactgatcccatgggtgtgcgg
atggcagagtttcctctcagtcccatgtttgccaagatgcttctcgagtcaggaaacttt
ggctgctccaaagagattgttaccattgcagcaatgatgcagattcagaatatatttgtt
gtgccgtccaatcagaagaaagctgctgcccgagagcacaggaagtttgcagttgctgag
ggagaccacctcaccatgctgaatgtgtacgaagcattcattaagcaccagaaaagctcc
cagtggtgtcaggaacacttcctcaattataagggtctgctgcgggctgggaccgtacga
gagcagctccggcgtctcatgaacaagttcaaggtgccacggacttcaagtgaaggcgac
cctgatgtgatcttgaagtgcattgtatatgggtttttcgctaatgcagcccgcatccac
cattctggttcctaccggactttacgagacgatcgcgagcttcacatccaccccaactct
gtgctgtttggagagaaacctccaaaatgggttgttttcaacgaagtggtgcagacggca
aaatactacatgcgcgacgtgaccgctgtggagtcgtcctggttggtcgagttggcccct
cacttttacaagcaggccaagcatggctcactggctagcaagaggtcccgggtcctctga
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