Perca flavescens (yellow perch): 114558482
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Entry
114558482 CDS
T07494
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
pflv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114558482 (ube4b)
04120 Ubiquitin mediated proteolysis
114558482 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114558482 (ube4b)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114558482 (ube4b)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
U-box type E3
114558482 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
114558482
NCBI-ProteinID:
XP_028438321
LinkDB
All DBs
Position
7:21810597..21831038
Genome browser
AA seq
1378 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGAVPQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAKSPDHRLTLVQPSSQAGSPMGPSAGSFGASSLSSLYGCGSPQSMALDAAKRTSPS
LLTPTTPSVPSTPSTPQFIVPPSPPATTTPRNTLNPPSAPMPISQRYRPYSVSSPWGAPS
LSSPGQRGFSFSGPSPSPAGPSVPPNTPVPVPPPSPQSLSLSSPRARNQPSSTPPPMVPP
SPRSNTRQAAFASRIPPSSPLSVLFFALSDMSQDSSDEDSEEEEDFSRVQFGSSLGACGV
GMSCESASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCI
SHVALVLQGALTQPRSPLHQSLLVPYLLCRNLPYGFIQELVRITHQEEEVFSQIFIPILH
GLALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCNLATSLPLWCPKPLSPGCGREI
QRLSYMGAFFSLSVFAEDDTKVGDKYFSGPAITIENTRVVSQSLQHYLESARGDLFKILH
NILLNGETREWALNYMASLVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLET
VDPYYIFHPRCRLVVSLEETRLKATMEELKSWMAELHEDPTKFSEPKFPTECFFLTLHTH
HLSILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVR
AKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNINLPLHPEIPKSFAALPEFYV
EDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAV
QPRTQRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQ
NLAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLP
REQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNL
QQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEE
VISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPV
ILPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRPV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagatccgcagaaggcgcctggcacgactggcaggggga
cagacatcacaacccagtacccctctcagcacacccctgacatccccacagagagagact
cccccaggacccctccctggaccctcaggtgccgtaccccagcccctgccaccagctgcc
tctcaatcattggggctcaatgtccacagtggcaccccagccacatctcctatgggcacc
tctggtgtggcatatggtagtcagagcagcgagggtgtgagctccctctccagctccccc
tccaacagccttgagactcagtcccagagtctgtctcgatcgcagagcatggacattgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcgcagggagaagaggaacttgactgaaaaggaaacctctgca
aactcagatgtctcagaagaacaggcgctgcagctcatttgtaaaatccttcgcgtatcg
tggaaggagcaggatagagatgtcatcttcctcccttcactagctgcagagttccaccag
aaccctaaagatgtatactctgacttcaaagacctgattggccagatcctgatggaagtc
ttaatgatgtccacccagtcacgtgtccacaacccttttgccagcttgaccgccacctct
cagccaattgcagccaaatcccccgaccaccgtctgacgctggtgcagccctccagccaa
gctggcagccccatgggccccagtgcagggtcttttggagccagctctctgtccagtctg
tatgggtgtggtagtcctcagtcgatggctttggatgcagccaagaggacctccccatct
ctcctcacccctactacaccctctgtaccttccacaccctctaccccgcaattcattgtg
ccccctagcccacccgctactactactccgagaaacactctcaaccctccatctgctcca
atgcccatctcccagcgctatcggccttactctgtctcctctccctggggggcgccttcc
ctatctagcccgggtcaaagaggatttagcttctctggaccctctcctagccctgcaggg
ccctctgttcctcctaacaccccagttcctgtgccaccacccagcccccagtccctttcc
ttgagctcacctagggctcgcaaccaaccctcctccacaccccctcccatggtgccccct
tctcccagatcgaatacccgacaggctgcttttgcttccaggatcccaccgtctagcccc
ttgtcggtcctgttctttgccctctctgacatgtctcaggacagcagtgatgaagattct
gaggaggaggaggatttttcacgggttcagtttggttccagtcttggtgcatgtggagtg
gggatgtcctgcgaatcagccagcgaccgcttcaccattgaagcatgcaaagagacagag
atgctgaactacctcattgagcgttttgacagtgttggcatggaggagaggaaagctcct
aagatgtgtagccaaccaaatgtcagccagcttctcagcaacattcgctcacagtgtatt
tcccatgttgccctggtcctgcaaggcgccctgacccagccccggagccctctccatcag
tctttgctggtaccttatctgctgtgtcggaaccttccttatggctttattcaggagctt
gtgcgcattacccaccaggaggaagaagttttcagtcagatcttcattcccatcctccat
gggctggctcttgcagtgaaagaatgctcctttgacagtgacaactttaaatttcccctt
atggcattagctgagctttgtgaaatcaagtttggaaagactcacccagtgtgcaatttg
gcaacttcactgcctctgtggtgtcccaaacctctgagtcctggttgtggcagagagatc
cagagactgtcctacatgggagccttcttcagcctctctgtgtttgccgaggatgataca
aaagtaggagacaagtatttctctggcccagccatcactatagagaacacgcgagtcgtc
agccaatcattgcagcactacctggagtcggcaaggggtgacctgttcaaaattctccat
aacattctactaaatggagaaacgcgcgagtgggctcttaattacatggcatctctggtc
aactacaatgtgaagaaagctcagatgcagactgatgacaagctggtgtcgacagacggc
ttcatgctcaacttcttatgggtgctgcaacagctgagcatgaagatcaagctggagaca
gtggacccttactacattttccacccacggtgtcgccttgttgtcagcctagaggagacg
cgtctgaaagccaccatggaggagctaaagagctggatggccgaactgcatgaagaccct
acaaaattctcagaacccaagttccctacagagtgtttcttcttgacactacacacccac
catttgtcaatcctgcctggctgcagacgttacatccgcaggttgcgagccatccgtgaa
ctgaacaggactgtagaggagctgaagaacagtgaaagccaatggaaagattctcccctg
gctagtcgacacagagagatgctcaagcgatgcaaaacccagctcaagaaactggtgcga
gccaaagcttgtgctgacgtgggccttctggatgagaacctcctccgcagatgtctgcag
ttctacagcacagtcatccagctcattcttcgcatggtggaccctgcctacccgaacatt
aacctgccactgcaccctgagattcccaaaagctttgctgctctgcctgagttctacgtt
gaagatgtggctgagtttctgctttttgtcgtgcagtattctccccaggttttatatgag
ccgtgcgtccaggacattgtcaccttcttggtggtgttcatctgcagccagaactacatc
aggaacccctatcttatcgccaagttggtggaggtgttgtttgtcaccaaccctgctgta
cagcctcgtactcagcgattctctgaaatgatggagaaccacccgttgtcggtcaaacag
ctggtccccgccctcatgaagttctacactgatgttgagcataccggcgccaccagtgag
ttctatgataagtttactatacggtaccatatcagcactatcttcaagagtctctggcag
aaccttgcccaccatggcaccttcatggaggagttcaactctggcaagcagtttgtgcgc
tacatcaacatgctgattaatgacaccaccttcttgttagacgagagcctcgagtccctg
aagcgtatccacgaagttcaagaagagatgaaaaataaggagcagtgggaacaactgcct
agggagcagcagcagagccgccaatcccagctgactcaggacgagcgggtgtctcgctcc
tatctggccctcgccacagagacggttgaaatgttccacatcctcaccaagcaggtccag
aagcctttccttaggcctgaactggggcctcgtttagctgccatgctaaactttaacctc
cagcagctctgtggccctaagtgtcgggacctgaaggtggagaaccccgagaagtatggc
tttgagcccaagaagctcttagaccagctgactgacatctacctgcagctagactgtgcc
cgctttgctaaagcgattgcagatgaccagcggtcgtacagccgcgagctctttgaagag
gtgatctcaaagatgaggaaggctggtattaagtcctctattgccattgaaaaattcaag
ctgctatcggagaaggtggaggaaatagtcgccaagaactctcaatctgaaatggactac
agtgacgcacctgacgaattcaaagaccctctgatggacacgctgatgactgaccctgtg
atactgccttcggggaatatcatggaccgatccatcatcttgcgccacctgcttaactcc
cccactgatccctttaacaggcagccactcaccgagagcatgctggagtcagtccctgag
ctgaaggagaggatccatacctggatgagagagaaacagggtggacggcctgtctga
DBGET
integrated database retrieval system
