Perca flavescens (yellow perch): 114558618
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Entry
114558618 CDS
T07494
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03030
DNA replication
pflv03410
Base excision repair
pflv03420
Nucleotide excision repair
pflv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114558618 (rfc2)
03410 Base excision repair
114558618 (rfc2)
03420 Nucleotide excision repair
114558618 (rfc2)
03430 Mismatch repair
114558618 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflv03032
]
114558618 (rfc2)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114558618 (rfc2)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114558618 (rfc2)
DNA replication proteins [BR:
pflv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114558618 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
114558618 (rfc2)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114558618 (rfc2)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114558618 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
114558618 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
DNA_pol3_delta2
AAA
AAA_22
RCF1-5-like_lid
AAA_16
Rad17
DEAD
RuvB_N
AAA_28
nSTAND3
Mg_chelatase
AAA_assoc_2
AAA_11
AAA_19
AAA_18
AAA_14
DNAX_ATPase_lid
DUF815
AAA_24
ORC-CDC6-like
AAA_30
Viral_helicase1
cobW
AAA_25
MnmE_helical
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
114558618
NCBI-ProteinID:
XP_028438484
LinkDB
All DBs
Position
7:complement(39336142..39342536)
Genome browser
AA seq
339 aa
AA seq
DB search
MEAEMLEAECEQQKPVESGQKADSGAGEPAVRVSYELPWVEKYRPVKLNQIVGNEETVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLSIHNQEGIEVVRNKIKMFAQQKVTLPKGRH
KIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDRIIEPIQSRCAVLRYAKLTD
GQVLARLQDIVHQEALSVSDDGLEAVIFTAQGDMRQALNNLQSTHSGFGFINSENVFKVC
DEPHPLLVKGMLGHCVAGDIDEAYRVVEALWALGYSPDDIIGNIFRVCKTLPMAEYLKLE
FIKEIGYTHMRMSEGVNSLLQMAGLLARLCSKTAPPAAS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgagatgttggaggctgagtgcgagcagcagaagccggtagaaagcggccag
aaggcggactcgggagccggagaaccggcggttagagtctcctatgaactgccctgggtg
gagaaatacaggccggtcaaactgaaccagatcgtggggaacgaagagacggtgagtcgg
ctggaggtgttcgcccgggagggaaacgtccccaacatcatcatagcaggtcctccagga
acagggaagacgaccagcatcctgtgtttgtccatacacaaccaggagggaatcgaagtg
gtgaggaacaagatcaagatgtttgctcagcagaaagtcacactgcccaaaggacgacac
aagatcatcatcctggacgaagccgacagcatgacggacggggcccagcaggctctgcgg
aggatcatggagatctactcgaagacgacccgcttcgccctggcgtgcaacgcgtctgat
cgcatcatcgagccgatccaatcacgctgcgccgtgctgcgctacgccaagctcacggac
ggacaggtcctcgctcgcctgcaggacatcgtccaccaggaggcgctgtctgtctctgac
gatgggctggaggctgtcatcttcaccgcacagggagacatgagacaggcgctgaacaac
ctgcagtcgacccactccggcttcggcttcatcaacagtgagaacgtgttcaaagtgtgt
gacgagccccaccccctgctggtgaaaggcatgctgggacactgcgtggcgggggacata
gacgaggcgtaccgcgtggtggaggcgctgtgggcgctcggatactcgccggacgacatc
atcgggaacatcttcagggtctgcaagaccctccccatggccgagtacctcaagctggag
ttcatcaaggagatcggctacacccacatgaggatgtctgaaggagtgaactctctgcta
cagatggccgggctgctggcccgactttgcagcaagacggccccccccgccgccagctga
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