KEGG   Perca flavescens (yellow perch): 114558618
Entry
114558618         CDS       T07494                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03030  DNA replication
pflv03410  Base excision repair
pflv03420  Nucleotide excision repair
pflv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114558618 (rfc2)
   03410 Base excision repair
    114558618 (rfc2)
   03420 Nucleotide excision repair
    114558618 (rfc2)
   03430 Mismatch repair
    114558618 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pflv03032]
    114558618 (rfc2)
   03036 Chromosome and associated proteins [BR:pflv03036]
    114558618 (rfc2)
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114558618 (rfc2)
DNA replication proteins [BR:pflv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114558618 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    114558618 (rfc2)
Chromosome and associated proteins [BR:pflv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114558618 (rfc2)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114558618 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    114558618 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 AAA AAA_22 RCF1-5-like_lid AAA_16 Rad17 DEAD RuvB_N AAA_28 nSTAND3 Mg_chelatase AAA_assoc_2 AAA_11 AAA_19 AAA_18 AAA_14 DNAX_ATPase_lid DUF815 AAA_24 ORC-CDC6-like AAA_30 Viral_helicase1 cobW AAA_25 MnmE_helical IstB_IS21
Other DBs
NCBI-GeneID: 114558618
NCBI-ProteinID: XP_028438484
LinkDB
Position
7:complement(39336142..39342536)
AA seq 339 aa
MEAEMLEAECEQQKPVESGQKADSGAGEPAVRVSYELPWVEKYRPVKLNQIVGNEETVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLSIHNQEGIEVVRNKIKMFAQQKVTLPKGRH
KIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDRIIEPIQSRCAVLRYAKLTD
GQVLARLQDIVHQEALSVSDDGLEAVIFTAQGDMRQALNNLQSTHSGFGFINSENVFKVC
DEPHPLLVKGMLGHCVAGDIDEAYRVVEALWALGYSPDDIIGNIFRVCKTLPMAEYLKLE
FIKEIGYTHMRMSEGVNSLLQMAGLLARLCSKTAPPAAS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggaggctgagatgttggaggctgagtgcgagcagcagaagccggtagaaagcggccag
aaggcggactcgggagccggagaaccggcggttagagtctcctatgaactgccctgggtg
gagaaatacaggccggtcaaactgaaccagatcgtggggaacgaagagacggtgagtcgg
ctggaggtgttcgcccgggagggaaacgtccccaacatcatcatagcaggtcctccagga
acagggaagacgaccagcatcctgtgtttgtccatacacaaccaggagggaatcgaagtg
gtgaggaacaagatcaagatgtttgctcagcagaaagtcacactgcccaaaggacgacac
aagatcatcatcctggacgaagccgacagcatgacggacggggcccagcaggctctgcgg
aggatcatggagatctactcgaagacgacccgcttcgccctggcgtgcaacgcgtctgat
cgcatcatcgagccgatccaatcacgctgcgccgtgctgcgctacgccaagctcacggac
ggacaggtcctcgctcgcctgcaggacatcgtccaccaggaggcgctgtctgtctctgac
gatgggctggaggctgtcatcttcaccgcacagggagacatgagacaggcgctgaacaac
ctgcagtcgacccactccggcttcggcttcatcaacagtgagaacgtgttcaaagtgtgt
gacgagccccaccccctgctggtgaaaggcatgctgggacactgcgtggcgggggacata
gacgaggcgtaccgcgtggtggaggcgctgtgggcgctcggatactcgccggacgacatc
atcgggaacatcttcagggtctgcaagaccctccccatggccgagtacctcaagctggag
ttcatcaaggagatcggctacacccacatgaggatgtctgaaggagtgaactctctgcta
cagatggccgggctgctggcccgactttgcagcaagacggccccccccgccgccagctga

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