Perca flavescens (yellow perch): 114558865
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Entry
114558865 CDS
T07494
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03083
Polycomb repressive complex
pflv04980
Cobalamin transport and metabolism
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114558865
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
114558865
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114558865
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114558865
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114558865
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114558865
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114558865
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
114558865
HMT complexes
COMPASS/SET1 complex
114558865
MLL-HCF complex
114558865
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
114558865
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114558865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
114558865
NCBI-ProteinID:
XP_028438937
LinkDB
All DBs
Position
7:complement(35495243..35541761)
Genome browser
AA seq
1642 aa
AA seq
DB search
MQDFYLPGDSDRASSVMASEPAVLNPRWKRILGWTGPVPRPRHGHRAVAIKELMVVFGGG
NEGIVDELHVYNTATNQWFIPAVRGDVPPGCAAYGFACDGTRLLVFGGMVEYGKYSSDLY
ELQASRWEWKRLKAKAPKNGPPPCPRLGHSFSLIGSCCYLFGGLANDSEDPKNNIPRYLN
DLYSLELRPGSSVVGWEIPQTSGLPPPPRESHTAVASSGRSANRLIIYGGMSGCRLGDLW
VLHIDSLTWSKPDLNGSAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCT
NTLACLNLDTMCWETVLMDSVEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCC
KDLWYLETERPCAPSRVQLVRANTASLEVSWGPSQTAETYLLQLQKYDIPTTPASSPAPN
PVPAAAPKCPAPVATAPANQSVPLSGLTLVQSPAASLAAAKAPAVLKVAAAPGATAGGAS
IVTVRQAAPKPQVALTTLPAGVRMVVPAQAGQGTPIGSSPQMSGMAALAAAAAATQKMPP
STATMMNVPAGATLVKTMAVSNPATRMLKTAAAQVGGTSVVSTPGTPGRPIITVHKSGTV
TVSQQAQVVTTMVGGVTKTITLVNSPLSMGGGGTLIGNLGNLGKMMTVVHTKPVQSGALT
VQAGSCPVTQILQAKGGLPAGTILKLVTSADGKQTAVLSTAQAGATTAKPTILGVAPATS
KPGTTYIKTIPMSALQGGAGANSPFTILTTKMMTPGTAGKIISTVPKITAAGQQGLTQVV
LKGAPGMPGTILRTVPMSGVRLVSSGAVGTKPAVTTLVVKGTTGVSSLGTGTGSVSTIAT
LANQVTTATAAAGPKQVTLITTPSGAEAQPLVQDLPVTFMASPTSEEPASSTTATTATTT
AAAAAAAAGEQGDTAAATVTQVCSNPPCETHETGTTNTSTVATATMGGNGRVCSNPPCET
HETGTTNTSTVATATMGGNGRVCSNPPCETHETGTTNTSTVATATMGGNGRVCSNPPCGT
RETGTTNTSTVATATMGGNGGVCSNPPCETRETGTTNTSTVATATMGGNGRVCSNPPCET
HETGTTNTSTVASASMSQQLQPAALSGATVCSNPPCETHETGTTNTATTATAQQSGDGPQ
GDAPDSASSSSDQASSSSSSSTTASQSRAVTTVTQSTPTPGPSIPAISSLVGDDKAESSE
AEAVATVMAAAAEEGEEPMQTAVLQVHMEDSEAAAQMDGLPQELMSSEGDSSEAVSGATT
TTLMVTGLTADQLAVGAATEDAVQQATIQAVLQAAGHIGGGAVDQSVPIVLTQAELAALV
QQQLQDVHNQPDSAEPEPQPSGVPTEGLAPADSLNDPAAESNGHELASSAVTSAVARLAS
TFGPAPPLTTGAVVKIQPAAAEATNGVAAAAGRVQVTSSVKDSQWYDVGIVKVTNMVVTH
YYVPYDDNMADDDSGVMPDYTQMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLP
GFPGAPCAIKISKNLDGAQLTWEPPAVTSGQITEYSVYLAIQSSQAAASGSGPAQLAFMR
VYCGPSPSCLVQASSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQESSKDAKAA
VKRPGTSPDAKPVGPKKFKTDQ
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttttatttaccgggagactcggaccgtgccagtagcgtcatggcatccgaa
cccgcggtgctgaacccccgctggaagcgcatcctgggctggaccgggccagtaccgcgg
ccccggcacggacaccgagccgtggctatcaaggagctaatggtggtgttcggcggaggg
aacgaggggatcgtggatgagctgcacgtctacaacacagctaccaaccagtggttcatc
cccgcggtgcgaggtgacgtcccccccggctgcgcagcgtacggctttgcgtgcgatggg
acgaggctgctggtgttcggagggatggtggagtacggcaaatacagcagcgacctgtac
gagctgcaggcgagtcgttgggagtggaaacgtctgaaggccaaggcgccaaagaacggc
ccgcccccttgcccccgcctcggacacagcttctctctgattggcagttgctgttacctg
tttggaggactggccaatgacagtgaagaccccaagaacaacatccccaggtatctgaac
gacctgtacagtctggagctgcggccgggctccagcgtggtcggctgggagatcccgcag
acctcaggtctgccgccgccgccccgagagagccacacggccgtggcgtcgagcgggcgc
tcggccaacagactcatcatctacggagggatgagcggctgccggctgggagacctgtgg
gtgctccacatagactccctgacgtggagtaaaccggaccttaatggatctgcgcccctc
ccccgcagcctgcactctgccaccaccatcaacaacaagatgtatgtgtttggaggttgg
gttcctctggtgatggatgatgtcaaagtggcgactcacgagaaggagtggaagtgtacc
aacacactggcctgtctcaacctagacacaatgtgttgggagacggtcctgatggacagc
gtggaggagaacctccccagagcccgagcaggtcactgcagcgtggccatcaactccaga
ctctacatctggagcggcagagacggctacagaaaggcctggaacaaccaggtgtgctgc
aaggacctgtggtacctggagacagagcgcccctgcgccccctctcgggtgcagctggtc
cgggccaacacggcgtctctggaggtgagctggggaccgtcgcagaccgccgagacctac
ctgctgcagctgcagaagtacgacattcccaccacgcccgcctctagccccgcccccaac
cctgtcccagcggccgcgcccaagtgccccgcccccgtcgccacggcaccggccaaccaa
agtgtcccgctgtccggcctcacgctggtccaatcccccgctgcctccttagccgccgct
aaagcaccagcggtcctgaaggtggcagcagctccgggggcaacagcaggcggggcctcc
atcgtcacagtgagacaggccgcgcccaaaccccaggtcgccctgacgacacttcctgcc
ggcgttcgtatggtggtacctgctcaggccggtcaggggacgccaataggaagcagtcct
cagatgagcggcatggcggcgctggctgcggcggcggcagcgactcagaagatgcccccg
tccacggcgaccatgatgaacgtccccgcgggagcaaccctcgtaaagacgatggctgtg
agtaatccagccactcggatgctgaagaccgctgccgctcaggtgggcgggacctctgtg
gtctccacccccgggacccccggccggccaatcatcacggtgcacaagtcgggcacggtg
acggtgtcccagcaggctcaggtggtcaccacgatggtgggcggagtcacaaagaccatc
acgctcgtcaacagtccgctcagcatgggtgggggcgggactctgatcggtaaccttggt
aacctggggaagatgatgaccgtggttcacaccaaaccagttcagagtggagcgctcact
gttcaggctgggagctgcccagtcacccagatcctccaggcaaagggcggcctcccagca
ggaaccatcttgaagttggtgacctcagcagacggcaaacagacggccgttctcagcacc
gcgcaggccggagccacaaccgccaaacccaccatcctgggcgtcgccccggcaacctcc
aaaccggggaccacctacatcaagaccatcccaatgtcagcgctgcagggcggggcaggt
gccaacagcccgttcaccatcctgaccaccaagatgatgacgccaggcaccgccgggaag
atcatctccacggtccccaaaatcactgcagccggccagcaggggctcacacaggtggtg
ctgaaaggcgctccggggatgcctggtacgatcctccggacagtgcccatgagcggagtc
cgactggtgtcatcgggagccgtcggcaccaaaccggccgtcaccacgctggtcgtcaag
ggaaccacaggtgtgtccagtctgggcacaggaacaggaagcgtctccaccatcgccacg
ctcgccaaccaggttaccacagcaaccgcagcagccggaccaaaacaggtgactctgatc
acgactccgagcggtgccgaggctcagccgctggtccaggatctgcccgtcaccttcatg
gcttctcctacgtcagaagaacctgccagtagtactactgctactactgctactactact
gcagcagcagcagcagcagcagcgggagagcaaggagacacagcggctgctacagtgacg
caggtgtgctccaacccgccctgcgagacgcacgagaccggcaccaccaacacctccacc
gtcgccacggcgaccatgggcggcaacggcagggtgtgctccaacccgccctgcgagacg
cacgagaccggcaccaccaacacctccaccgtcgccacggcaaccatgggcggcaacggc
agggtgtgctccaacccgccctgcgagacgcacgagaccggcaccaccaacacctccacc
gtcgccacggcaaccatgggcggcaacggcagggtgtgctccaacccgccctgcgggacg
cgcgagaccggcaccaccaacacctccaccgtcgccacggcaaccatgggcggcaacggc
ggggtgtgctccaacccgccctgcgagacgcgcgagaccggcaccaccaacacctccacc
gtcgccacggcaaccatgggcggcaacggcagggtgtgctccaacccgccctgcgagacg
cacgagaccggcaccaccaacacctccacggtggcgtccgccagcatgagccaacagctg
cagccggcagctctgagcggagccaccgtctgctccaacccgccatgcgagacccacgag
acgggaaccaccaacactgccaccacagccacggctcagcagagtggagacggtccgcag
ggagacgctcctgactcggcttcctcctcctctgaccaggcctcctcctcctcctcctcc
tccaccacagccagccagagcagagctgtcaccacggttacacagtccacgcccacccct
gggccctccatacctgctatctcctcattggtcggagatgacaaggcggagtcctcagag
gcagaggctgttgccacggtgatggcggcggccgcagaggagggggaggagcctatgcag
acggcagtgttacaggttcacatggaggacagcgaagcagcggcacagatggacggtctt
cctcaggagctgatgtcatcagagggggactcaagtgaggcggtctccggggcgaccacg
acgaccctgatggtgacgggactgaccgcggatcagctggctgttggcgcggcaacggag
gacgccgttcagcaggcgacgatacaggcggtcctgcaggcagcggggcacatcggaggc
ggggcagtggaccagtccgtccccatcgttctgacccaagcggagctggctgctctggtc
cagcagcagctgcaggacgtccacaaccagccagactcagccgagccagaacctcagccc
agcggcgtgcccacagaaggccttgctccagccgacagcctgaacgacccggcagcagag
agcaacgggcatgagcttgcgtcgtcggcggtgacgagcgccgtggcacgactggccagt
acgtttggccccgccccccctctgacgaccggggccgtggttaagattcaacctgccgcc
gccgaggcaaccaatggcgtcgcagcagctgcagggagggtccaggtgacatcatcggtg
aaagacagtcagtggtacgacgtcggcatcgtcaaggttaccaacatggtggtcacacat
tactacgtcccctacgacgacaacatggctgacgatgactcgggtgtgatgccggactac
acccagatgaggaaggtggagctgcagccggggacggcctataagtttcgcgtcgcgggg
atcaacatctgcggccgtggcgcgttctcggaggtgtcggcctttaaaacgtgtcttcct
ggtttccccggagcgccgtgcgccatcaagatcagcaagaacctggacggggctcagctc
acctgggagcccccggccgtcacgtcggggcagatcacggagtactcggtgtacctggcc
atccagtccagccaggcggccgcctccggttctggcccggcccagctggctttcatgagg
gtgtactgcggccccagcccttcctgcctggtccaggcctccagcctcgccaacgcccac
atcgactacaccaccaagcccgccatcatcttccgaatcgccgcccgcaaccagaagggc
tacgggccggccacgcaggtccggtggctccaagaaagcagtaaagatgccaaagcagca
gtgaagagacccggaacttctcctgatgctaaacctgtcggaccaaagaagttcaaaacc
gaccaatag
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