Perca flavescens (yellow perch): 114559080
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Entry
114559080 CDS
T07494
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114559080 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114559080 (efl1)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
Pre-60S particles
GTPases
114559080 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
DUF6667
MMR_HSR1
ARM_LRRK2
tRNA_bind_2
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
114559080
NCBI-ProteinID:
XP_028439312
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All DBs
Position
1:7354669..7476918
Genome browser
AA seq
1124 aa
AA seq
DB search
MGHTSLDKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYRNGDQDYLLNLIDSPGHIDFSSEVSTAVRLCDGAIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLILELKLTSQEAYSHLQKILEQVNAVTGTL
FTSKVMEERAEKEKEEAAEEKEEEEKESEIVSGDQVYDWSAGLEEADDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAHIYSQKMGIKAEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKQL
FVQLVLDNIWSLYDAVVTRRDKEKVEKVIASLGVKVLARDSRHSDPKVLLSAICSQWLPL
AQAVLSMVCEKLPSPIDMTAERVEKLMSVGPRRFDSLPEQTQELKRAFLQCSSGENDPLI
IFVSKMFAVDTKALPQNRQRPLTQEEIAQRRELARQRHADRMAADQTAAESRSQEGQPAG
CDSAKMESLTLKDSQPEEEDQQTFVAFARVYSGVAKKGQRVFVLGPKYDPARGLSMLPEG
SSAWDRVPAVPHLSVCSMDSLYLLMGRELEELDEVPVGNVLGIRGLEECVLKSATLSSSP
ACPPFIPLNFEATAILRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTA
GEVHLQRCLDDLRKRFAKIEISASKPIIPFRETVVRPPKVDMVNEDLGKQHKVAIIHQVK
EEASQGRPSDTVHVDHSGLVTLTTPNRLATVSVRAIPLPQEVTCLLESSTELIRTLEQVN
MSLREGKSLEVSPRTLEAIAGLKAQLESLLQGRKWRNAVEHIWAFGPRRYGPNILLNLVE
GYQRPSLWQCLGRGDQAGEAGAQAASMRDLDNSIVSGFQLATLSGPMCEEPLMGVCFAVE
RWEIQSSAALPQHQDSLEEDSISHGALTDSRVEGSSETWTAGPCQARRRPQAASADCYGP
VSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLGKREGRVLHEEMK
EGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPCWVPTTEEEYLH
FGEKADSANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagcctggataagatcattgcactgcagagaaaccctgccaacattaga
aacctttgcattctggcgcatgttgaccatggcaaaactactctggctgactgcttggtg
gcaagtaatggtatcatatcaagtcggttggctgggaagctgaggtatctggacagccgg
gaggatgaacagatcagaggaatcactatgaagtccagtgccatctccctccattacaga
aatggagatcaggactacctactaaatctgatcgactctcctggtcacattgacttctcc
tcagaggtttccactgctgtccgcctgtgtgacggggccattatagttgttgatgctgtg
gagggagtgtgtcctcagacccaggctgtgctgcgccaggcgtggctggagaacatcagg
cccgtcctggtcatcaacaagatagaccgactcatcctggagctgaagctcacctctcag
gaagcttacagccacctgcagaagatcctggaacaggtgaacgcggtgacaggcactttg
ttcacatccaaagtgatggaggagcgggcggagaaagagaaggaggaggcagcggaggag
aaggaggaggaggagaaagaaagcgagattgtgagtggagatcaggtttacgactggagt
gccgggctggaggaggccgacgactcccaactctacttctcccccgaccaggggaacgtg
gtgtttgccagcgccatcgatggctggggcttcagcatccagcagtttgcccacatctac
agccaaaaaatgggtatcaaggcagaggtgctgctcaaaaccctgtggggagatttctac
ctcaacgctaaagcaaagaagatcatgaaaggagctcaggccaaaggaaagaagcagctg
tttgtgcagctcgtgctggataacatttggagtttatatgatgccgttgtcactaggaga
gacaaggagaaggtggagaaggtgatcgcatcgctcggggtgaaggtgttggccagggac
tctcgtcactcggaccccaaagttcttctttctgccatctgcagccagtggttacctctg
gcccaggctgtcctctcgatggtgtgtgagaaacttcccagtcccatagacatgacggca
gagagggtggagaaactgatgagtgtcgggccgcggcggtttgactcactgcccgaacag
acgcaagagctgaagagagcgttcctccagtgttccagtggggaaaacgatccgctcatc
atctttgtgtccaagatgtttgctgttgacaccaaggccttgcctcagaacagacagagg
ccgttgacccaggaggagatagcccagcgcagggagctggcccggcagagacatgctgac
aggatggcagctgatcagacggcagcagagagccgctcacaggaaggccaacctgcagga
tgtgactcagctaagatggagagtctgaccctgaaggactcccagccggaggaggaggat
cagcagaccttcgtcgcgtttgcgcgggtctacagcggcgtggccaagaaaggacagaga
gtatttgtgctgggaccaaagtatgaccccgcccggggcctgagcatgctgccagagggt
tccagtgcttgggaccgtgtgcctgccgtgccccatctgtccgtctgttccatggacagc
ctctacctgctgatgggccgggagctggaggagctggacgaggtgcctgtagggaatgtc
ctgggtatcagaggtctggaggagtgcgtgttgaagtcggccacactgtccagctccccc
gcctgcccgccattcatcccactcaactttgaggccacggccattttacgggttgccata
gaacccaaacacccaagcgagatgcccaagctggtgcgtgggatgcgtctgttgaaccag
gcggatccctgtgctgaggttctgatccaggaaacaggagaacacgttctggtcacggct
ggcgaggttcacctccaacgctgcctggacgacctcagaaagcggtttgctaaaatagag
attagcgcgtccaagcccatcattccattcagagaaacagtggtacgtcccccgaaagtg
gacatggtgaacgaagaccttgggaagcagcacaaagtagccatcattcaccaggtgaaa
gaagaagcctctcagggtcgtccgtctgacaccgtccatgtggaccacagtggactggtc
accctcacaactcccaacagactggccactgtcagcgttcgggccatccccctgccacaa
gaggtgacctgtctgttggagagcagcacggagctgattcggactctggaacaggtgaac
atgtccctgagggaggggaagagtctggaggtcagccccagaaccctggaggccattgct
ggactcaaggcccagctggagagcctgctgcaggggaggaagtggaggaacgctgtggag
catatctgggcctttggccctcgcagatatggtcccaacatcctgctgaaccttgtggag
ggctaccagcggccctcgctgtggcagtgtctgggcaggggagaccaagctggcgaggcc
ggagctcaggccgccagtatgcgagacttggacaacagcatcgtcagcggcttccagctg
gcaactctgtcagggcccatgtgtgaggagcccctgatgggagtgtgctttgctgtggag
aggtgggagatccagtcgtctgcagccctgccacagcatcaggactcgttggaggaggac
tccatatcccatggggctttaacagacagcagagtggaaggaagcagtgagacatggaca
gcggggccgtgccaggccaggcgcaggccgcaggcggcctctgcagactgctacgggccg
gtctccggtcagctgatcgccgccatgaaggaggcctgccgccacgccttccaggctcag
ccccagaggctcatggctgccatgtatacctgcgagataatggccactgctgaggtgctg
ggccgagtatatggcgtactggggaagcgagagggtcgtgtcctccatgaagagatgaag
gaagggacggacatgttcatcatcaaggccgttctgcctgtggccgagagctttggattt
gccgatgagatccgcaagaggaccagcggattggccagtccacagctggtcttcagccac
tgggaggtgatcagcagcgacccatgctgggttcccaccacagaggaagaatacctgcac
ttcggggagaaagccgactctgcaaaccaggccctgaaatacatgaacgctgtccgccgc
cgcaaaggcctctacgtggaggagaagatagtcgagcacgcagagaagcagagaacactc
ggcaagaacaagtag
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