Perca flavescens (yellow perch): 114559185
Help
Entry
114559185 CDS
T07494
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114559185
03015 mRNA surveillance pathway
114559185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114559185
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114559185
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114559185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114559185
NCBI-ProteinID:
XP_028439493
LinkDB
All DBs
Position
7:5806124..5813797
Genome browser
AA seq
487 aa
AA seq
DB search
MSEDSWAVAVDVQEATNPSTQFDFSKKVERVRGPRNIRGDINGNILPEKTENGGSKREAE
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNLGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPDNKWTQCLCIAPTY
ELALQIGQVIEQMGALCPDVKLAYGIRGNRLERGVKLQEQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAN
LTNEGHQVALLSGEMTVEQRAAVIDRFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDVINQIEMHFNRRITKLDTSNLE
EMESLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcggttgctgtggatgtccaagaagccacaaatccatccaca
cagtttgacttctcaaagaaagttgagcgagtgcgtggtcctcgtaacataagaggagac
ataaatggcaacatattgccagagaagactgaaaatggaggttcgaaaagagaagcagaa
aaagtggacctggctgaacagtccctgttgaataagctgatccgccgctctctggtgcgg
aacagaaaccaggtggaggtcctgcagcgggaccccacctctcctctctactccgtcaag
acatttgaagagctgaggctgaaacctgagctactgaagggtgtgtacaacctgggtttc
aacagaccatccaggatccaggagaatgccttgcccatgatgttggcgcagccacctcag
aatctgatcgcccagtcccagtctggcaccggtaaaactgctgctttttctcttgccatg
ctcagccatgtaaacccggacaataagtggacccagtgcctttgcatcgcgccaacatat
gagctcgctctgcagatcggccaagtaatcgagcaaatgggggcattgtgccctgatgtg
aaactggcttacggcattcggggcaacagactggagcgaggcgtcaagttgcaggagcag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagtacaagctcatcgac
cccaagaagattactatgtttgtgctcgacgaggctgatgtgatgatcgccacgcaaggc
caccgggaccagagcattcggatccatagacagctgacgaaggactgccagatgctcctt
ttctctgcaacctttgaggactctgtgtggaggtttgcagagcaggtggttcccgatccc
aacatcatcaggctgaagcgtgaggaggagacactggacacaatcaagcagttctacgtg
ctctgtagggagaaggaggacaagttcacagcactctgtaatctttatgggagccttacc
attgcacaggccatgatcttctgccatactcgcaagatggctgcttggctgactgcgaac
ctgacaaacgagggtcaccaggtggcgttactgagcggggaaatgaccgtggagcagaga
gctgccgtcatcgatcgcttcaggaacggcaaggagaaggtcctggtgaccacaaacgtg
tgctccaggggtattgacgtggaacaagtgtcacttgtggtcaactttgacctccctgtg
gacatggatgggaacgccgacaacgagacctaccttcaccggattggccgcacaggacgc
tttggcagaaggggatttgccgtcaacatggttgacagcaaacacagcatggatgtcatc
aaccaaattgagatgcatttcaaccggagaatcacgaaacttgacacgagcaatctggaa
gaaatggaaagcctgatcagctga
DBGET
integrated database retrieval system
