Perca flavescens (yellow perch): 114559246
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Entry
114559246 CDS
T07494
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114559246 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114559246 (hdac6)
04131 Membrane trafficking [BR:
pflv04131
]
114559246 (hdac6)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114559246 (hdac6)
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114559246 (hdac6)
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114559246 (hdac6)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114559246 (hdac6)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114559246 (hdac6)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114559246 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114559246
NCBI-ProteinID:
XP_028439604
LinkDB
All DBs
Position
7:complement(35696811..35732804)
Genome browser
AA seq
1043 aa
AA seq
DB search
MQSGPDPPGPKSVRRSPRLSPQCGSSKGNEERKGGGLQEAKRRGKMERSREEDEELSDRL
QTLDLSSRTAASGTGLVSSDIFTHHKNLWDSSHPESPDRVTCIMEELQRQDLLSHCIRVE
PREAAEEDLLLAHSKDHVGLMKSTQAMTERELQTLSEKYDSVYLHPESFQVSLLAVGSVL
QLVDQVMTSELRNGFAVIRPPGHHAQSNMANGYSIFNNVAIAARYAQKRHSVDRVLIVDW
DVHHGQGIQYLFQEDPSVLYFSVHRYEHGSFWPHLSESDCRFVGSGRAVGRNINLPWNKT
GMTDADYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDPKGDMCVSPQCFHVLTHMLMS
LAEGRLVLALEGGYNLQSTAESAAACVRALLGGACPPLTPPTAPSDSALQSISQTVTALY
PHWASLQTLEGGPLADGRVSRATTNKQSTKQSGPAPSIPTTTGLVYDERMMEHMNMWDRH
HPEQPQRIFKIFSKHQQLGLVDRCQRIPARLATEEELSRCHSVQHIEQMKATAAMKPRDL
HKLGLEFNSIYINNQSFQSALLAAGGCFAAVESILTGQVSNAVAIVRPPGHHAERDSPCG
FCFFNTAALAARHAQKISQDALLRVLILDWDVHHGNGTQHMFEDDDSVLYVSLHRYDNGT
FFPSSEDAAADRVGVSKGAGYNVNVAWNSGRMGDSDYLAAFHSVIMPIATEFNPGLVLVS
AGFDAARGDPLGGYQVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISDSMAMCTSVL
LGDPPPSLVTPLPPPHHSAVATINSVIRHHAPYWTSLRIHIPEAVRASLPALKHRGKRSS
KGKGRKSEPSSADKPLLPPTGLEDTTTERGLEQLTQGLAGLDISQANRTSATSTPVGGAR
PKVRLILTCEGEVKAEPGEMTPEQSQSAESTLPQPQAVAVAASESVAPRDSPAGGAGAEL
ETEGACGWSKPKTSLELTCGGQTDTPLYVVDPLSWCPHLDAVKPLPQVSTSSSRVRTAAR
TLRTGPVSPATRCSAAATLTSTW
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggaccagatcctcccggaccgaagtcagtcagaagatctcctcgtctgtct
cctcagtgcggcagcagtaaaggaaacgaggagaggaaaggaggaggtctgcaggaggcg
aagaggagaggcaagatggagagaagcagagaggaggacgaggagctgagcgacaggttg
cagacgctggatctgtccagcaggacagcagccagtggaacaggtctggtttcctctgac
atcttcacccatcataagaacctgtgggactccagtcatccggagagtccagaccgagtg
acatgcatcatggaggagctgcagagacaggacctgctgtctcactgcatcagagtcgag
cccagagaagctgcagaagaggatctgctgctcgctcactcgaaagatcacgtgggtttg
atgaagtcgactcaggcgatgacagagagggaactacaaactctgtctgagaaatacgac
tcagtttaccttcatcctgagtccttccaggtgtctctgttggcggtgggttcggtcctc
cagctggttgatcaggtgatgacctctgagctcaggaacggattcgctgtcatcagacct
ccaggtcatcatgctcagtccaacatggccaacggttactctattttcaacaacgtggcg
attgcagctcgatacgctcagaaaagacactcggtcgacagggtgttgatagtggactgg
gatgttcatcacggtcagggcatccagtacctgttccaggaggaccccagtgtcctgtac
ttcagtgtccacaggtatgagcatgggtctttctggcctcacctgtcggagtctgactgc
cggtttgtgggcagcggacgagctgtaggcagaaacatcaacctcccctggaacaagacg
gggatgacagacgctgattacatcgcagcttttcaacaactgctgctgcctgtagcctac
gagtttcagcctcagctggttctggtctcggctggatttgatgctgcagtcggagatcca
aagggggacatgtgtgtgagtcctcagtgtttccatgttctgactcacatgttgatgagt
ttggcagaaggtcgactggtactggctcttgagggaggttataacctgcagtcgacagca
gagagcgccgcggcgtgtgtcagagctctgctgggaggagcctgtcctcctctgactccc
cccaccgctccatctgacagtgctctgcagtccatctctcagactgtcaccgctctgtat
ccacactgggcttctctgcagacactggaaggcggcccattggctgacgggcgtgtcagc
agagcaacaaccaacaagcagagcacaaagcagagcggccccgccccctccattccaact
acaacaggtctggtttatgatgagaggatgatggagcacatgaacatgtgggacagacat
caccctgaacagcctcagaggatctttaaaatcttctccaaacatcagcagctaggattg
gtcgatcgttgccaacggataccagctcgcttagctacagaggaggagctgtccaggtgt
cacagcgtgcagcacattgagcagatgaaggccacggcagcgatgaagcccagagatctg
cacaaactgggcctcgagttcaactcgatctacatcaacaaccagagcttccagtcggct
ctgctggctgccggaggctgcttcgctgctgtggagagcattctcacgggacaggtgagt
aacgcagtggccatcgttcgtccacctggtcatcacgcagagagagattctccgtgcggt
ttctgtttcttcaacacggcagccctcgctgctcgccacgcccagaaaatatcccaagat
gcactgctgcgggtcctcatcctggactgggacgttcaccacggcaacgggacgcagcac
atgttcgaggacgacgacagcgtcctgtacgtctccctccatcgctacgacaacgggacg
ttcttcccgtcttcggaggacgccgccgccgacagggtgggcgtgtccaagggggcgggc
tacaacgtcaacgtggcgtggaacagcgggcgcatgggcgactcggactacctcgcggcc
ttccacagcgtcatcatgccgatcgccaccgagtttaaccccggtctggttctggtgtcg
gccgggttcgatgcagctcgcggggatccgctgggcggatatcaagtgacccctgaggga
tacgcccacctcacacacctgctgatgtcactggccggggggcgggtcctactcatcctg
gagggaggttataacttgtcgtccatctctgactccatggcgatgtgcaccagcgtgttg
ctaggagaccctcctccctccttggtgacgcccctccctcctcctcatcacagcgccgtg
gcaacgatcaactccgtcatccgacaccacgccccctactggacgtcgctgaggatacac
atcccagaggctgtgcgggcgtcccttcccgccctgaagcatcgtgggaaacgtagttcg
aaaggaaaaggcaggaagtcagagccgagcagtgccgacaaacccctgctgccccctaca
ggactggaggacacaacgacggagcgcggccttgagcagctcactcagggattggccggt
ttggacatcagtcaagccaatcgcacttctgctacgtccacccctgtgggcggggccagg
ccgaaggtccgcctcattctcacctgtgaaggggaagtgaaggcggagccaggggaaatg
acacctgagcagagccaatcagcagagagcacgctgccacagcctcaggctgttgccgtg
gcagcgtcggagtcagttgccccccgagactcacctgcaggtggagcgggggcggagcta
gagaccgagggagcgtgtggttggtcgaagccgaagacgtctctggagctgacgtgtgga
ggacagacagacacccctctgtacgtggtggaccccctgtcctggtgtcctcatctggac
gccgtgaagcccctcccccaggtatcgacgtcttccagtcgtgtcaggactgcggctcgg
acgctgagaactggacctgtctcacctgctaccaggtgttctgcggccgctacgttaacg
agcacatggtga
DBGET
integrated database retrieval system
