Perca flavescens (yellow perch): 114559618
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Entry
114559618 CDS
T07494
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
114559618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflv04812
]
114559618
Cytoskeleton proteins [BR:
pflv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
114559618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
114559618
NCBI-ProteinID:
XP_028440171
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Position
8:complement(35471897..35541813)
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AA seq
556 aa
AA seq
DB search
MSNALLRRSSTKQGLQNLIRLTAQRSVEDAEEVEREQRRRAREASRWTNGGSLPAQSSLE
NETPAEESMYNGALKPSGSPSLEEDEGFSDWTQRRERQRQQRLQELGHGGEEDDDEEENA
INKAVPAKSVQASVASSSRLQRQRHEDEEDGAAVEMERKKQREEEEMEDERKRKEVMTRR
EEIQRPNTEMEKRKDVKISYTSKVFLHQESKLGNGDSTKEEVTSYKSKTTKRPTSFRSRA
AEPEESQAILETERRLEKIRLGLQQKESQELEQLRHRQAEAEQELEQLKKRREERRRVRE
EEERRREEEEQQRLAREEEERRRMKEDIERRRTEAAERMKSLSTSSADGDEAFSPFCPKA
PTHKITERTESLNRSLKKSNSFKKTATLVLLPKIDDKLEQYAHAVENSQEARAVKATLTD
LPSSPEVVSSKKTLFEAGEAWSQAPAKLACKDAEGLKVVVAERITRWVKGPSDGSRPALC
KPTDVRPGDVMQKKNMWEVIGDSIGQPGTHRVKGSAAGKKYKFVVTGHGKYEKIPVDDEN
EGEFINAESDLYPDRY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctctgctgagaagaagctccaccaaacagggtctacagaacctgataagg
ctgacggctcagaggagcgtggaggacgcagaggaggtggagagggagcagcgccggaga
gctcgggaggcgtcccgctggacaaacggtggctcgctgccggctcagtcttcactggag
aacgagacgccggcagaggagagcatgtacaacggcgccctgaagcccagcggctctccg
tccctggaggaggacgaaggcttcagcgactggactcagcgccgagagagacagaggcag
cagcgcctgcaggagctcggccacggaggtgaggaggacgacgacgaagaggagaacgcc
atcaacaaagccgtgcccgcaaagagcgtccaggcgtcggtcgcgtcctccagccggctc
cagagacagcggcacgaagacgaagaggacggagccgcggtggagatggagaggaagaag
cagcgagaggaggaggagatggaagacgaaaggaagagaaaggaagtgatgaccaggagg
gaggagattcaaaggccgaatacagagatggagaaaagaaaagacgtgaaaatctcctac
acgtccaaggtgttccttcaccaagagtcgaaactcggcaacggagactcaaccaaagag
gaagtgacgtcatacaagagcaagacgacaaaaagacccaccagttttcgcagcagagcc
gcggagccggaggagtcgcaggccatcctggagacggagcggcgcctggagaagatccgg
ctgggcctccagcagaaggagagccaggagctggagcagctgaggcaccggcaggccgag
gccgagcaggagctggagcagctgaagaagaggagggaggagaggcgtcgagtccgcgag
gaagaggagcgtcgccgggaggaggaggagcagcaacggctggccagagaggaggaggag
aggaggcgcatgaaggaagacatcgagaggaggaggacggaggcagcggagaggatgaag
agcctgagtacgtccagcgcggacggagacgaggccttcagtcccttctgtcccaaagct
cccactcacaagatcaccgagagaacggagtcgctgaaccgctcgctgaagaaaagtaac
agctttaagaagacggcgactctcgtcctgctgcccaagatcgacgacaagctggagcag
tacgcccacgctgtggagaactcccaggaggctcgggcagtgaaggcaacactgaccgac
ctgcccagctcgcctgaggttgtctcctccaagaaaactctgtttgaggccggagaagcc
tggagccaagcgcccgccaagctagcctgcaaggacgccgaggggttgaaggtggtcgtg
gccgagcggatcactcggtgggtgaaagggccgtcagacggcagccgaccggcgctctgc
aaacccacagatgtgcggcccggagatgtgatgcagaaaaagaacatgtgggaagttatc
ggagactcgataggtcagcccgggacacacagagtcaagggttcagcagctgggaaaaag
tacaaatttgtggtcactggtcacggaaaatatgagaagatccccgtggacgacgagaac
gaaggagagttcattaacgcagagtctgatttatatcccgatcgttactga
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