Perca flavescens (yellow perch): 114559999
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Entry
114559999 CDS
T07494
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114559999
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114559999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_31
HTH_26
DUF494
HTH_24
CUT
HTH_37
Motif
Other DBs
NCBI-GeneID:
114559999
NCBI-ProteinID:
XP_028440901
LinkDB
All DBs
Position
1:complement(1131614..1148647)
Genome browser
AA seq
510 aa
AA seq
DB search
MFQQCEEPRFTIEQIDLLQRLRRTGITQVEVLHALDTLDHLDRQHGHKLTHKPPYMPPSS
SLSSSSAVVASSSTTSTATQTSFPNNRLSPSPNNNFDTASPLLPIPVASPVAMAAVVQNG
LVAVTNGKLSPPRFPLAVVSGGVTAPGYGFETSEEDLDVDDKVEDLMRRDSAMIKEEIKS
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKSNPGATLAMR
AAPLALEEVMDWHQAPPPFGSAPGGFRLRRGSRFTWRKECLAVMESYFIDNQYPDEAKRE
EIATACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSP
GGQSNSDEVDGNDFPDQGCEVSLFDKRASARHFGFSRADLSSPTQVPTMLPSWFSALGRG
GLSGQRGTSLIGRSLVSGSGPQAEGSRLTGVSWSPPSPSLQDEPALSEPQDPIGLEKTDV
NHSNQALANQVDAAGRGIGNDIKTETLEDD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagtgtgaggagcctcgtttcaccattgagcagattgacctcctccagagg
ctacggaggacaggtatcacacaggtggaggtcctccacgccctggacaccctggaccac
ctggaccgccaacatggacacaagttgacccataagcctccctacatgcctccctcgtct
tccttgtcctcttccagcgccgtcgtcgcctcttcttccacgacttccaccgccactcag
acaagtttccctaacaaccgactctccccgtcacccaataacaacttcgacaccgcctcc
ccgcttctaccgattccagtagcatcgcctgtcgccatggcagcggtagtccagaacggc
ctagttgctgtcaccaacgggaagctgtctcctccccggtttcctcttgctgttgtgagt
ggcggtgtcacagcgccaggctacgggttcgagaccagcgaagaggacttagatgttgat
gacaaggtggaggacttgatgaggagggacagtgctatgatcaaagaagagattaagtcc
ttcctggcgaacaggcggatctcccaggctgtggtcgctcaggtaacggggatcagtcag
agtcggatctcccactggctcctacagcagggatcagacctcagcgagcagaagaaaaga
gccttctttcgctggtaccagctggagaaaagcaaccctggtgccactcttgctatgcga
gccgccccattggctctggaggaggtgatggactggcaccaagccccgcctccatttggc
tcggcccccgggggcttccgcctgcggcgagggagcagattcacctggaggaaggagtgt
ctggctgttatggagagctacttcattgataaccagtaccccgatgaagccaagagagag
gagattgccaccgcctgcaacgctgtcattcagaaaccaggaaagaagctgtccgatttg
gagagggtaacatctctgaaggtctacaactggtttgccaaccgccgcaaagacatcaag
aggcgtgctaacattgaagcagccatcttggagagccacggcatcgaggttcagagtcca
ggcggtcagtccaacagtgacgaggtggatggcaacgacttccccgaccagggttgtgag
gtgtccttatttgacaagagagcttcagcaaggcactttggtttcagtcgagctgacctg
tcctctccaacccaggtacccacaatgctccccagctggttttctgccctgggtagagga
ggcttgtctggacagagaggcacttctctgattggccgatcccttgtgtcggggtccggc
cctcaggcagaaggttccagattgacaggcgtgtcctggtctcccccctcgccctccctc
caggacgaacctgcgctgtccgagccccaggacccaatcggtttggagaagacggatgtc
aatcacagcaaccaagccctagccaatcaggtggatgcggcagggcgcggtattgggaat
gacatcaagacggaaacgctggaggacgactga
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