Perca flavescens (yellow perch): 114560042
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Entry
114560042 CDS
T07494
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03420
Nucleotide excision repair
pflv04115
p53 signaling pathway
pflv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114560042 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
114560042 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
114560042 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560042 (ddb2)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114560042 (ddb2)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114560042 (ddb2)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114560042 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
114560042
NCBI-ProteinID:
XP_028440984
LinkDB
All DBs
Position
8:complement(21788278..21793636)
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AA seq
496 aa
AA seq
DB search
MKMRPKKSADASESKSKVKKRAGENSGPTLSKKLRERKDGETSKQGPHLKSAGAQKRGGY
GSILHYIYKSTLGQSLHSKMRQCLQEPFVRSLSSYHFHGATSPFDRRITCLEWHPTHPTT
LAVGSKGGDIYLQDFKVPTKKTFLQGSGAGDFIAGMKFCPTDLSKVYVASGEGTLTMQSF
EGRTPTVLSRSQDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNVGQLVLLGLDGQKIFSDK
LHKAKVTHAEFNPRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHERAVNSAYFNPL
DCSKLLTTDQYDQIRIYSSFDWSKPQHIIQHPHRQFQHLTPIKATWHPFYDLIVVGRYPD
DRVCPGDQRTIDIFDSNTAELVCQLQDPTTSGIKSINKFNPMGDVIGSGMGVTVLVWDQN
ESLISDRHKAQEKTSTSVDSLRGQRRRRQQRSSRDRRGPVVDAKLKKKLASLEESETKTK
THAGCAKQKQAQMRKK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagaccgaagaagtcagcagatgcgtctgaatcaaagagtaaagtgaagaaa
agagctggggagaactctggtccaactctctcaaaaaaactacgagaaagaaaagatggc
gaaacatctaaacaagggcctcatctcaagtctgcaggagcccaaaagagaggagggtat
gggagcatcctgcactacatttacaagagcactctgggacaaagtcttcactcaaagatg
agacagtgtctccaggaaccttttgttcgctcgctctcatcctatcatttccacggtgct
accagccctttcgaccgcagaatcacctgtctggagtggcaccccactcatcccaccact
ctggctgtgggttccaaaggtggtgacatatatctgcaggactttaaggtgcccacgaag
aaaacttttcttcaagggagcggagcaggagacttcatcgctgggatgaagttttgcccg
acagacctttccaaagtctatgtagcatctggtgagggcacattgaccatgcagagcttt
gagggccgcacacccaccgttctgtccagatctcaagactgtggtcacgatcaccacaat
gtttgttactggtactgctgtgttgatgtttctgttagtcgacagatgcttgtgacagga
gacaatgtgggacagcttgtactcctgggtttggatggccaaaagattttcagtgacaag
ttgcacaaagccaaagtgacccacgcagagttcaacccccgttgtgattggttattggcg
acagcctcagtcgaccacactgtgaaactttgggacctgagaaacatcaaagacaagaag
agttttctccacgagatgcctcatgagagagccgtcaattcagcctacttcaacccattg
gactgctccaagttgctcaccacagatcagtacgatcagatccggatctactcgtccttt
gactggtcgaagcctcaacacatcatccaacatccacacagacagtttcagcatctcaca
cccatcaaggccacatggcaccctttctatgacctaatcgttgtgggccgctaccctgat
gaccgagtttgccccggagatcagaggaccatcgacatctttgattccaacacagcagag
ctcgtgtgtcagctgcaagatcccaccacttcagggatcaaatctatcaacaagttcaat
ccaatgggtgatgtgattggatctggaatgggtgtaacggtgctggtctgggatcaaaac
gagtcactgatcagtgatcggcacaaagcacaggagaaaacctcgacctcagtggacagt
ttaagaggccagcgaaggagaaggcagcagcgctccagcagggacaggagaggtcctgtt
gtggatgcaaagcttaagaagaaactggcttctctggaagaatcagagaccaaaaccaag
acccacgctgggtgtgccaaacaaaaacaagcacagatgaggaagaagtaa
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