Perca flavescens (yellow perch): 114560139
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Entry
114560139 CDS
T07494
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114560139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114560139
03036 Chromosome and associated proteins [BR:
pflv03036
]
114560139
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114560139
Coactivators
SAGA/TFTC/STAGA complex
114560139
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114560139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
114560139
NCBI-ProteinID:
XP_028441091
LinkDB
All DBs
Position
8:38586280..38637011
Genome browser
AA seq
932 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKAPAASYSDGKRDAAPTAAGHFSGK
VREQVGSVEPQQGHPKAALLTQEPGANVSEPLSGKALTSSTSSVAAGAVIAAGASLQTVG
VGASPVISPGTLPTQPGAASFQRTAVLGSSVLAPGSSVLAPGSSVLAPGSSVLAPGSSSA
EAIRTASPGLQSLNGGSGAVKLGATTVISTASTGGSTIISPMASQPNNFAPQPTVASPAA
GTLQRIPGPVNGLDPKAAPSPAASSSQAGSAAAVTLKPAVNGVGQPAVALVRPPGAVVRP
PGAVVTAIQQQRPGLVGGPNRAPAPPQPQIAVRPQQQTIQLPPGFSMPPGMVLVRTETGQ
LVMVPQQVLAQAQAKTQQAQAQAQAAANLNQRPAAPTAGTAIRVSTAATAPQTVRLAAPV
QTRMVQSPSTTVQKALTVAPGGAAVSVKMTPQKAQTVITAGGTPVAKPAGVPSAPLTSTT
PPTTPTTPARVNMVSQEMQENVKKCKNFLATLIKLASHNSPSPDTSKNVKALVQDLLDAK
IEPEEFTTRLQAELKSSPQPYLIPFLKKSLPTLRQSLLSNQQSLVTPSTSAPHHHHHGHQ
APAANSPLANTMAVNRAGVQPVQTRSPVVFSQTLRPQGTLVSRPMTIIGRGLVTPAATAN
QRKLSDPGGGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDEAFLPPG
LLHRRILDTARKLGVSEVPLDVVNLVSHATQSRLRALLEKVSVVAQHRSDSGKDEEHHEA
SSDVRSQLRFFEQLERMEKQRKDDQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQEL
AQIRQRDANLTALAAIGPRKKRKMGSPGGAAPGSEVASGSAAGSPAAAASASSSRQQLRQ
RITRVNLRDFIFCLEQERCTARSLTLYKALLK
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggatgagaaagca
gttagcgacttagttggctctctggagtctcagctcggcgacagaaaggctcccgccgct
tcttattccgacgggaaacgggacgcagcgccaacggccgccgggcacttctcagggaaa
gtgcgcgagcaagtggggtctgtggagccgcaacaagggcatccaaaagcggcgttactg
acccaggaacccggcgctaacgtttctgagccgctctccgggaaagccctcacttcttct
acctcctctgtcgccgccggggccgtgatcgccgccggagcgagtctacaaacagttgga
gtcggagcatctcccgttatctccccgggaactttgcccactcagcccggcgcagctagc
ttccaacggacggctgttctgggctcgagcgttctggctccgggctcgagcgttctggct
ccgggctcgagcgtcctggctccgggctcgagcgtcctggctccgggctcgagctcggcg
gaggcgatcaggaccgcttctcccggattacaaagtttaaacgggggttccggggctgta
aagttgggggccaccacggtgataagtaccgccagtaccgggggatccacgatcatatcc
cccatggcttcgcagccgaataacttcgctcctcagcccacagtggcgtctcccgccgcc
ggtactctgcagaggatccccggcccggtgaacggactggaccctaaagctgccccctcc
ccggcagcctccagctctcaggctgggagtgctgctgcggtgaccctgaagccggcagtg
aacggcgtgggccagccggccgtggcgctggtcaggccgccgggcgccgtggtgaggccg
ccgggcgccgtggttacggccatccagcagcagagacccgggctggtggggggccccaac
agagcccccgcccccccccagccacagatcgctgtcaggccacagcagcagaccatccag
ttaccaccaggcttctccatgcccccagggatggttctggtccggacggagacgggccag
ctggtgatggtcccccagcaggttctggcccaggcgcaggccaagacgcagcaggcccag
gcccaggcccaggcagcggccaacctcaaccagagaccggcagcgccaacagccgggacc
gccatccgggtcagcaccgccgctacggctcctcagacggtccgcctggccgcccccgtt
cagaccaggatggttcagtctccctccaccaccgtacagaaggctctcacggtggcgccg
ggcggagccgcggtgtcggtaaagatgaccccccagaaggctcaaacggtgatcaccgct
ggggggacgccggtggccaaacctgccggcgtcccgtccgccccgctgaccagcaccacg
ccccctaccacgcccaccacgcccgccagagtcaacatggtgtcgcaggagatgcaggaa
aacgtgaagaagtgtaagaactttctggccactctgatcaagctggcgtcgcacaactct
ccttccccggatacctccaagaatgtcaaggccctggtacaggacctgctggatgcaaag
attgagccggaggagttcaccactcggctgcaggctgagttgaagtcctccccacagccc
tacctcatccccttcctcaagaaaagcctcccgacgctgcgccagtctctgctcagcaac
cagcagtctctggtgacccccagcacctcggccccccaccaccatcaccacggccatcag
gccccggctgccaactctccactcgccaacaccatggctgtgaaccgagcaggagtccag
ccggttcagacccgttctccagtcgtcttcagtcagactctcagacctcaggggacactc
gtgagtcgacccatgacgataatcggcagaggtctggtgacgccggcagctacggccaat
cagaggaagctgagcgacccggggggcgggaccttcagagatgacgatgacatcaacgac
gtggcgtccatggcgggggtcaacctcaacgaggagaacgcccgtatcctagcaaccagc
tctgagctggtggggaccaagatccgctcgtgtaaagacgaagccttcctgccccccggg
ctgctgcaccgccgcatcctggacactgctaggaagcttggggtgagtgaggtccctctg
gacgtggtgaacctggtgtcccacgccacccagtcccgcctgcgagcgctgctggagaaa
gtctccgtcgtggcccagcaccgctcagactctggcaaggatgaagagcatcacgaggcc
tcgtcagacgttcgctctcagcttcgcttcttcgagcagttggagcggatggagaaacag
aggaaggatgaccaggagagagagatcctgctgaaagctgccaagagtcgagctcggcag
gaggatcctgaacaggctcgtctgaagcagaaagctaaagagatgcagcagcaggagctg
gctcagatcagacagcgagacgccaacctcacggccctcgccgccatcgggccgcgcaag
aaacgcaagatgggctcaccgggaggcgccgcgccgggcagcgaggtggcatccggctcg
gctgcaggctccccggctgcagcagcgtctgcctcgtcgtcccggcaacagctgcgtcag
cgaatcacacgagttaacctcagggacttcatcttctgtctggagcaggaacgctgcaca
gctcgctcactcacgctctacaaggccctgctcaaatga
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