Perca flavescens (yellow perch): 114560199
Help
Entry
114560199 CDS
T07494
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114560199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560199
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114560199
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
HECT type E3
114560199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WD40_RLD
RCC1
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
114560199
NCBI-ProteinID:
XP_028441206
LinkDB
All DBs
Position
8:complement(8596063..8607376)
Genome browser
AA seq
1021 aa
AA seq
DB search
MFAWGEDSQRGFRLKDGSNVDSRPTTDNGVHLLNVSYHITDLSGGHNVLAFVKSNGNSFI
IRTNVSKDGRRVRGKQKFVECKEKIKAVSCGDDMVTLLSERGKVLCVDATRTYIPRPLEA
LCSIPVCQVACGSQHSVALTKDGQVYTWGQDSRGQLGLGKRKPGANSPQHLRSLSALPLV
QIAAGGEQSFALSVSGGVFGWGRNHCGQLGLGDTTDRHTPTPVHCLNMKETINISCGKDH
TAILTKTGAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVSKTACGRNHTLVLTDSK
RVYSFGCGEQGQLGHGEESHPSVPLPVQLPPDTTDDPKVRNIFAGGNCSFATCRSNEDLH
EEANNDVTRHCLDDKIDKWTSECDSKSWKNIKQEIHRTFSSASCANASFLEQRKDKHFQT
SSKYSGLNLSLARRAFKKLVKKDNVFAELEAAVLHLLPCLDTKPVGVEGLRIYLLLNELL
HVIQKHKRQKSTKLSEVVAAAVINLSTDSIQVIGDWWSSLSPSTMVRHVKMWKQALSLIL
SYEPVPRNSGVRNLLLVLQCMYNANSRIAEPRKMPERDFCLLIDKDFLIEDLRLWRLRSQ
RKNMPAEPLILCSFPILMDLESKQFAFEMNAEITKVEAIQRASLDLFWEYGWISPQDLLF
QLDVRRGSVLEDTLELLAVACHSDYKLPLVIDFDENLTIDLQLYKKDFFHEVFHEMVSVE
YGMFMFNDSETLAWFPSKATHEVQRYFQFGLLCGLAMYNQCIIHLPFPLALFKKLLGVKP
SLMDMIEFSPFVGKGLLEILEVYEDNVIESLLYLFKINWDGTEVDLDLENPEKPVTGQNK
KEFVDAYVNHAFNASVERVFQEFKRGFFQVCDKDLVKLFRPKELQEVLVGKDFQDWAKLK
QNTVYEGEYNTTPPHPTIQMFWEVFDELTEDQKKAFLWFVTGFERVPFNEMEKIKMTVKV
QQVQDLSYDRYYPMTHTCFSTLELPLYSTKEIMQTKLTEAMSNNRRIQGGLNTVIEHFVN
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcatggggagaggacagtcagcggggctttcgcttaaaagatggctcaaatgtc
gacagtagacctacaacagataatggggttcatcttttgaacgtcagttatcacatcacg
gatctgtccggaggtcacaacgtgctggctttcgtcaaaagtaacggaaactcgttcatt
attcgcacaaatgtgagcaaagatgggagaagagtccgaggaaaacagaagtttgttgag
tgtaaagagaagattaaggctgtgagttgtggtgatgatatggtcacactgctgtctgag
agaggaaaagttctctgtgtggatgcaactcgtacttacattccaaggcccctggaagct
ttgtgtagcataccagtttgtcaggttgcttgtgggagccagcattcagttgctctgacc
aaagatggtcaggtatatacatggggccaggactccaggggccagctgggtctggggaag
aggaagcccggcgccaattcaccccaacacctacgatcactgtcagcgctccccctggtc
cagatcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggc
tggggcagaaaccactgtggacagctcgggctgggagacacaacagacagacatacacca
actcctgttcattgcctgaacatgaaggaaacaattaatatttcctgtggaaaggaccac
actgccattttgacaaagactggtgcagtgtttacatttggctctggccaatatggacag
cttgggcacaactcattcagagatgaactacgaccccggcttgttgcagagctctggggg
gcaaaggtctccaagactgcatgtggacgaaatcatacattagtgttgacagactccaag
agggtctactcctttgggtgtggagagcaggggcagctgggacatggagaggagagtcat
ccatctgtgccgctacctgttcaactgccaccggacaccactgatgatcctaaagtcaga
aacatcttcgcaggaggaaactgttcatttgcaacatgcaggtctaatgaggaccttcat
gaagaggcaaacaacgatgtaacacggcattgtcttgatgataagattgacaaatggacc
tctgaatgtgattcaaagtcatggaaaaacattaaacaggaaattcacaggacgttctcc
tctgcatcttgtgcgaatgcaagcttccttgagcaacgcaaagataaacatttccagact
tcatcaaagtactctggcttgaacttgtcacttgcacgacgagctttcaagaaactggta
aagaaggacaatgttttcgcagagcttgaggctgctgtcctgcacttgcttccttgcctt
gatacgaagcctgtgggagtggagggattgagaatctacctgcttctcaatgagctcctg
catgtgatccaaaaacacaaacggcaaaaaagcacaaagctttctgaggtggtcgctgct
gctgtaataaacttgtctactgacagcatccaggtcataggggactggtggtcctcactg
tcaccttccaccatggttagacatgttaagatgtggaagcaggccctctcactgatcctg
tcctatgagcctgttcctcgcaactctggagtcagaaacctgctactagtcctccagtgc
atgtacaacgccaacagcaggattgcagagcctcgaaagatgccagaaagggatttttgt
ttgttgattgacaaagactttcttattgaggatctgcggctttggcgtttacggtcacaa
cgcaagaatatgcctgcagagccacttatcctttgtagctttccaattctgatggatctg
gagtcaaagcaatttgcttttgaaatgaatgctgaaatcaccaaggtggaagcaatacaa
cgcgcctctttggatttgttttgggaatatggatggatttcccctcaagacctgctcttt
caactggacgtgaggcgaggatcagttttggaagacacccttgaactactggctgttgct
tgtcacagtgactacaagttgccacttgtgattgattttgatgaaaacttgacaatcgat
ctacagctctacaaaaaagacttttttcatgaagtctttcacgagatggtgtcagttgaa
tatgggatgttcatgttcaacgactccgaaacactggcatggttcccttccaaagcaaca
catgaggtccagagatacttccagtttgggcttctgtgtggattggctatgtacaaccag
tgcatcatacacctacccttcccattggctctgttcaagaagctgctcggtgtcaagcct
tcactgatggatatgatagaattcagcccatttgtcggaaagggtctgctggaaatccta
gaagtctacgaagacaatgtcatagaaagtctcttatatcttttcaaaatcaactgggat
gggacagaggttgaccttgatcttgaaaatcctgaaaagccagttacaggtcaaaataag
aaggagtttgtggatgcctacgtgaatcatgccttcaacgcatcagtggagagggtgttt
caggagttcaagcggggcttcttccaggtgtgtgacaaggatttggtgaagctgtttcga
ccgaaggagctgcaggaagtgctggtgggcaaagacttccaagactgggcaaagctgaaa
cagaacacagtttatgagggggagtacaataccacaccaccacaccctaccatacagatg
ttttgggaggtttttgatgaactaactgaggatcaaaagaaagctttcctttggtttgtg
actggctttgaaagggtgccgtttaatgaaatggaaaagatcaagatgactgtcaaagtt
caacaagtccaggacctctcctacgaccggtactaccctatgacacacacatgtttctca
accctggagctgcccttatactcaaccaaggagatcatgcaaaccaagctgacagaggcc
atgagcaacaacagacgaatacaaggaggacttaacactgtaatagagcactttgtaaat
ggatga
DBGET
integrated database retrieval system
