Perca flavescens (yellow perch): 114560200
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Entry
114560200 CDS
T07494
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114560200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114560200
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114560200
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
HECT type E3
114560200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
114560200
NCBI-ProteinID:
XP_028441208
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All DBs
Position
8:complement(8578946..8593130)
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AA seq
990 aa
AA seq
DB search
MFSWGEDCEQGFRLRDGSTTSTGDGVHLLNLSFGITDVSAGHNVLAFVKSNGDAAIIRTN
ESTDGIRVRGKQKFVKCKEKIQAVSCGDDMVTLLSDRGQVLCVDATRTYIPRPLEALCKI
PVSQVACGSQHSVALTKDGQVYTWGQDSRGQLGLGKRKPGANSPQHLRSLSALPLVQIAA
GGEQSFALSFSGGVFGWGRNHCGQLGLGDTTDRHTPTPVHYLNSKKTIHISCGKNHTAIL
TKTGAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVNKTACGRHHTLVMTDSKRVYS
FGCGTKGQLGHGEESHPSVPLPVQLPQDTTPILRNIYAGGNCSFATCTPVQEADEKSNTD
SVNNVKQHSIEYMIDKWVSKCDLKSSKKIKQEIYRTFSSASCMNRVFLDQSKDKHFQTSP
KYSGLNLSLVQPAFEKLVKKDDVLAEVEAAVLHLLPSFDEKSVGVEGLRIFLLLNELLHV
IQRHKLQQSIKLAEAVAAAMQRLSAESLQVIGDWWSSLSSSTKVRHVKVWKQALSLILSY
VLPRNSGVRNLLLVLQYMYNANNRIARRQRIPEKSFSLGISETFLYEDLQIWHSMSKIKD
MDYQPLILFNFTFVMDLKSKKMAFDLNAACTQKEHQANGRVPETNPYFELKLKRASLLEG
TFKKLAAADHSAFKKPLLVYFDEDPKVTDVYKRDLFHHLFLEMVSTKSGMFMFNDSETLA
WFPSTATEEDKTNFFLVGVLCGLALYNKSIIHFPFPLALFKKLLDVEPTLEDMMEFSPSV
GKSLQYVLDYEDDLENLDMCFLINWNGKEIDLDPQNPGKAVTGQNKKEFVDAYVNHAFNT
SVESVFQEFKRGFFQVCDRDFVKLFRPEELQRVLVGQDVYDWAKLKQNTVWELRVGYTMQ
MFWEVFDELTEDQRKDFLWFLTGFRRVPILGMDQVQMKVRLMQIQGGQHYDQHFPCALTC
YSILELPLYSSKEIMRDRLTKALITERGFL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggactgtgagcagggctttcggttgagagatggctcaactaca
tcaacaggtgacggagttcaccttttaaacctgagttttggcatcacggatgtgtcagca
ggtcacaatgtgctcgccttcgtcaaaagtaatggagatgcagccatcattcgcacaaat
gagagcacagatgggataagggtcagaggaaaacagaagttcgtgaagtgtaaagagaag
attcaggctgtgagttgtggtgatgatatggtcacactgctgtctgatagaggacaagtt
ctctgtgtggatgcaactcgcacttacattccaaggccccttgaagctttgtgtaaaata
ccagtttctcaggttgcttgtgggagccagcattcagttgccctgaccaaagatggtcag
gtgtatacatggggccaggactccaggggccagctgggtctggggaagaggaagcccggc
gccaattcaccccaacacctccgatccctgtcagcgctccccctggtccagatcgctgca
gggggagagcagagcttcgccctctctttctccggaggtgtgttcggctggggcagaaac
cactgtggacagctcgggctgggagacacaacagacagacatacaccaactccagttcat
tacctgaactcgaaaaaaactattcacatttcctgtggaaagaaccacactgccattttg
acaaagactggtgcagtgtttacatttggctctggccaatatggacagcttggccacaac
tcattcagagatgaactacgaccccggcttgttgcagagctctggggggcaaaggtcaac
aagactgcatgtggacgacatcacacattagtgatgacagactccaagagggtctactcc
tttgggtgtggaacgaaggggcagctgggacatggagaggagagtcatccgtctgtgccg
ctacctgttcaactgccacaggacaccactcccatacttagaaacatctacgcaggaggg
aactgttcgtttgcaacatgcacacctgttcaggaagcagatgagaaatcaaacactgac
agtgtcaacaatgtcaaacagcactctattgaatacatgattgacaaatgggtctctaaa
tgtgatttaaaatcatcaaaaaaaataaaacaggaaatctacaggacattttcctctgca
tcctgtatgaatcgagtcttccttgaccaaagcaaagataaacatttccagacctcacca
aagtactccggcttgaacttgtcacttgtgcaacctgctttcgagaaacttgtgaagaaa
gatgatgttttggcagaggttgaggctgctgtcctgcacttgcttccctctttcgatgag
aagtctgtgggagtggagggattgaggatcttcctgcttctgaatgagctcctgcatgtg
atccagagacataaactgcaacagagcatcaagctcgctgaggcggtagctgctgcaatg
caaagactgtctgctgaaagcctccaggtcataggggactggtggtcctcactgtcatcc
tccaccaaggttagacatgttaaggtgtggaagcaggccctctcactgatcctgtcctat
gtccttcctcgtaactctggagtcagaaacctgctactagtcctccagtacatgtacaac
gccaacaacaggattgctagacgtcagagaatcccagaaaaatctttttctttggggatt
agcgaaacatttctttacgaggatctgcagatttggcattcaatgtcaaaaatcaaggat
atggattatcagccacttatcctttttaacttcacatttgtgatggatctgaaatcaaag
aaaatggcttttgacctcaatgctgcatgcactcagaaagaacaccaggcaaatggaagg
gttcccgagacaaatccttattttgaactgaagctgaagcgagcatcacttttggaaggc
accttcaaaaaactggctgctgctgatcacagtgccttcaagaagccactcttggtctat
tttgatgaggacccaaaggtcacagatgtctacaaaagagacctttttcaccacttgttt
cttgaaatggtgtcaactaaatctggaatgttcatgttcaacgactccgaaacgctggca
tggttcccctccacagcgacagaagaggacaagacaaacttcttcctggttggggttctg
tgtggattggccttatacaacaagagtatcatacacttcccattcccactggctctgttc
aagaagctgctagatgtagagccgacactggaggatatgatggaattcagcccaagtgtt
ggaaagagtctgcagtacgtcttggactatgaagatgacctagaaaacctggacatgtgt
tttttgattaactggaatgggaaagagattgaccttgatccccaaaatcctggaaaggca
gtgacaggtcaaaataagaaggagtttgtggatgcctacgtaaatcatgccttcaacaca
tcagtggagagtgtgtttcaggagtttaagcggggcttcttccaggtgtgtgacagggat
tttgtgaagctgtttcggccagaggagctgcagcgagtgctggtgggccaagatgtctat
gactgggcgaaactgaaacagaacacagtgtgggaacttcgtgttggctacaccatgcag
atgttttgggaggtttttgatgaactgactgaagaccagaggaaagatttcctttggttc
ctgactggttttagaagggttcctattcttggcatggaccaggtccagatgaaggttcga
cttatgcaaatccaggggggtcagcactacgatcagcacttcccgtgtgctctgacatgt
tactctattctggagctgcccttatattcatccaaggagattatgcgagacaggctgaca
aaggccctgataacagagagaggattcttgtga
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